DRSC/TRiP Functional Genomics Resources

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Protein Alignment side-VI and CNTN1

DIOPT Version :10

Sequence 1:NP_001036705.1 Gene:side-VI / 4379854 FlyBaseID:FBgn0083950 Length:1087 Species:Drosophila melanogaster
Sequence 2:NP_001834.2 Gene:CNTN1 / 1272 HGNCID:2171 Length:1018 Species:Homo sapiens


Alignment Length:1096 Identity:222/1096 - (20%)
Similarity:365/1096 - (33%) Gaps:331/1096 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 PIYSYDTRGAHAGTPSHWR----DEEVLEDRAVFRTHKEPAELII-NPVKEKDAGNFRCRVDFKL 128
            |:|.             ||    |.::..|    |.......|:| ||.|:||||.:.|......
Human    73 PVYK-------------WRMNNGDVDLTSD----RYSMVGGNLVINNPDKQKDAGIYYCLASNNY 120

  Fly   129 SQTRNSNVNLEV-VVPPTQPIIFNER-RLRIDSRAGPYEEGGSLEVTCVVYGGSPP---PTVI-- 186
            ...|::...|.. .:.|..|   .|| .:|:       :||..:.:.|     .||   |..:  
Human   121 GMVRSTEATLSFGY
LDPFPP---EERPEVRV-------KEGKGMVLLC-----DPPYHFPDDLSY 170

  Fly   187 -WLMNGQLQNSVVDYTYD-----GAINSKLVVRNLSRIHQHAVYTCQASNFHKKYVATNITIDLY 245
             ||:|    ...|..|.|     ...|..|.:.|: .......|:|..|       :.:||..::
Human   171 RWLLN----EFPVFITMDKRRFVSQTNGNLYIANV-EASDKGNYSCFVS-------SPSITKSVF 223

  Fly   246 LR--PLLVEISFNNQPMSAD-------------RKYEIECQAIGSRPPAKITWWMGNLELHGHSQ 295
            .:  ||:.......:|..||             :...:||.|:|: |...|.|           :
Human   224 SKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGN-PVPDIRW-----------R 276

  Fly   296 KVSE----DGNVSTS--VLSITPTR-EDHGKALSCRATNELVRNGIRETAMKLNVFFIPTLQLDL 353
            ||.|    ...:|||  ||.|...: ||.| ...|.|.|  :|...:..| ::.|...|    :.
Human   277 KVLEPMPSTAEISTSGAVLKIFNIQLEDEG-IYECEAEN--IRGKDKHQA-RIYVQAFP----EW 333

  Fly   354 GSNLNPEDIEEGDDVYFECKVHANPAAYKVVWKHNHQIIQHNQRAGVIVSSGDLALQGVTRHQAG 418
            ..::|..:::.|.|:|:.|.....|.. .:.|..|          |.....|:|.|..||...||
Human   334 VEHINDTEVDIGSDLYWPCVATGKPIP-TIRWLKN----------GYAYHKGELRLYDVTFENAG 387

  Fly   419 NYTCTASNVEGDGDSNVVELKVM-YKPI--CRPDQKKIYGVARNEAAEIVCEVDAFPPPENFKWS 480
            .|.|.|.|..|...:| .|||:: ..|.  ..|.:|||. .|:.....|.|:..|.|.|: |.||
Human   388 MYQCIAENTYGAIYAN-AELKILALAPTFEMNPMKKKIL-AAKGGRVIIECKPKAAPKPK-FSWS 449

  Fly   481 FNNTAETFDMPQSGFRPHSAQGSTLTYTPVKEMDFGTIMCWADNNVGQQK--------EPCVFHL 537
                 :..:...:..|....:..:|....:...|.|...|:|:||.|:..        :|....|
Human   450 -----KGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIIL 509

  Fly   538 IAAGKPEAPTNCTVVNQTSDSLEVYCIEGFDGGMRQWFLME----IFD----------------- 581
                   ||.|..:.  ..::..:.|...||..:...|:..    :.|                 
Human   510 -------APINADIT--VGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSN 565

  Fly   582 ----------QHSGQL---------QANISAKFAALSVTGLDAG-RLFRIYVYAVN---GRGRSD 623
                      :|:|:.         .::.||........|...| |:..|...:|.   .||..:
Human   566 GELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTWSRGSDN 630

  Fly   624 AIALDGYTLKAAEKQTVALTSYKGSAQSPDNFE----------LTPILSIGIFVGILVAIVCIGI 678
            ...:..||:   :.:|:....:|.:...|...|          |.|.:.....|   ||...:|.
Human   631 HSPISKYTI---QTKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRV---VATNTLGR 689

  Fly   679 G--TIAALKLRSHKHQQQQKFVHPNAKFSRPG-----NLQIKDKISLPLSHSEEMYDEKNPDVVP 736
            |  :|.:.::::..       ..||...|..|     |.::....: |||. |..|......:|.
Human   690 GEPSIPSNRIKTDG-------AAPNVAPSDVGGGGGRNRELTITWA-PLSR-EYHYGNNFGYIVA 745

  Fly   737 YNEVDG-EYKQKSATQTPSGH-------LSTTSEVEISCKPGSTSGTG----IVQANSADSGTYQ 789
            :...|| |:|:.:.|...:|.       :|.::..::..|..:..|.|    :...|||.....:
Human   746 FKPFDGEEWKKVTVTNPDTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLVAVINSAQDAPSE 810

  Fly   790 ----------SSKDDELHYAELSLTNMPSGSSGASKKGQPMGGVGVVQHVVQQQQ---------Q 835
                      ||.:..:|:..                        |::.:|:..|         :
Human   811 APTEVGVKVLSSSEISVHWEH------------------------VLEKIVESYQIRYWAAHDKE 851

  Fly   836 QQQGQVQHPHQLLGGTLPHGSSMRKLLPT----IPATATLQRHKPNAGGMQHPH-------QHAP 889
            :...:||...|      .:.:.:..|||.    |...|.      |:.|...|.       :.||
Human   852 EAANRVQVTSQ------EYSARLENLLPDTQYFIEVGAC------NSAGCGPPSDMIEAFTKKAP 904

  Fly   890 PPTYDYDYFEEPTIYAQIDAYKTMQVDTGVVVAGVGAGAGSGVNGAGASISSPGSHGTPSTVSPG 954
            |.       :.|.|.:.:.:.....:....|||   ....|.|.|........|.|..       
Human   905 PS-------QPPRIISSVRSGSRYIITWDHVVA---LSNESTVTGYKVLYRPDGQHDG------- 952

  Fly   955 TVQMYTLPQH--------PGGYHTLPHNHH-------AQQQMAGGPQNSASMMQMM 995
              ::|:..:|        .|.|......|.       :|.:::|.|..|.|::.::
Human   953 --KLYSTHKHSIEVPIPRDGEYVVEVRAHSDGGDGVVSQVKISGAPTLSPSLLGLL 1006

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-VINP_001036705.1 IG_like 35..140 CDD:214653 19/75 (25%)
Ig_3 165..230 CDD:464046 17/75 (23%)
Ig 262..343 CDD:472250 26/100 (26%)
Ig strand B 266..270 CDD:409416 0/3 (0%)
Ig strand C 280..284 CDD:409416 1/3 (33%)
Ig strand F 320..325 CDD:409416 1/4 (25%)
Ig strand G 336..339 CDD:409416 0/2 (0%)
Ig_3 358..426 CDD:464046 19/67 (28%)
Ig_3 456..524 CDD:464046 15/67 (22%)
FN3 545..622 CDD:473895 19/120 (16%)
CNTN1NP_001834.2 IgI_1_Contactin-1 40..134 CDD:409436 19/77 (25%)
Ig strand A 42..46 CDD:409436
Ig strand A' 49..54 CDD:409436
Ig strand B 60..68 CDD:409436
Ig strand C 73..79 CDD:409436 3/18 (17%)
Ig strand C' 81..84 CDD:409436 0/2 (0%)
Ig strand D 90..94 CDD:409436 1/3 (33%)
Ig strand E 96..102 CDD:409436 2/5 (40%)
Ig strand F 109..118 CDD:409436 3/8 (38%)
Ig strand G 121..134 CDD:409436 2/12 (17%)
Ig2_Contactin-2-like 142..230 CDD:409392 24/111 (22%)
Ig strand A 144..149 CDD:409392 1/11 (9%)
Ig strand B 153..159 CDD:409392 1/10 (10%)
Ig strand C 168..174 CDD:409392 1/5 (20%)
Ig strand C' 179..181 CDD:409392 1/1 (100%)
Ig strand D 186..191 CDD:409392 0/4 (0%)
Ig strand E 194..198 CDD:409392 1/3 (33%)
Ig strand F 208..216 CDD:409392 3/14 (21%)
Ig strand G 218..230 CDD:409392 3/11 (27%)
IgI_3_Contactin-1 241..328 CDD:143259 26/102 (25%)
Ig strand A 241..246 CDD:143259 2/4 (50%)
Ig strand A' 249..254 CDD:143259 0/4 (0%)
Ig strand B 257..266 CDD:143259 2/8 (25%)
Ig strand C 272..276 CDD:143259 2/14 (14%)
Ig strand C' 279..281 CDD:143259 0/1 (0%)
Ig strand D 289..292 CDD:143259 2/2 (100%)
Ig strand E 293..298 CDD:143259 2/4 (50%)
Ig strand F 306..314 CDD:143259 3/8 (38%)
Ig strand G 317..328 CDD:143259 1/11 (9%)
Ig 332..408 CDD:472250 24/87 (28%)
Ig strand B 348..352 CDD:143205 1/3 (33%)
Ig strand C 361..365 CDD:143205 0/3 (0%)
Ig strand E 374..378 CDD:143205 2/3 (67%)
Ig strand F 388..393 CDD:143205 2/4 (50%)
Ig strand G 401..404 CDD:143205 1/3 (33%)
Ig5_Contactin-1 413..501 CDD:409438 23/94 (24%)
Ig strand A 413..418 CDD:409438 1/4 (25%)
Ig strand A' 421..426 CDD:409438 3/5 (60%)
Ig strand B 430..437 CDD:409438 1/6 (17%)
Ig strand C 445..449 CDD:409438 1/4 (25%)
Ig strand D 463..466 CDD:409438 0/2 (0%)
Ig strand E 467..472 CDD:409438 1/4 (25%)
Ig strand F 480..488 CDD:409438 3/7 (43%)
Ig strand G 494..501 CDD:409438 0/6 (0%)
Ig6_Contactin 503..601 CDD:409359 14/106 (13%)
Ig strand A 503..509 CDD:409359 1/5 (20%)
Ig strand A' 512..517 CDD:409359 1/4 (25%)
Ig strand B 520..528 CDD:409359 1/7 (14%)
Ig strand C 537..541 CDD:409359 1/3 (33%)
Ig strand D 562..565 CDD:409359 0/2 (0%)
Ig strand E 566..570 CDD:409359 0/3 (0%)
Ig strand F 579..586 CDD:409359 1/6 (17%)
Ig strand G 593..597 CDD:409359 1/3 (33%)
FN3 610..697 CDD:238020 19/92 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 693..717 5/30 (17%)
FN3 <745..>945 CDD:442628 41/245 (17%)
fn3 811..893 CDD:394996 16/117 (14%)
FN3 905..989 CDD:238020 16/102 (16%)
Blue background indicates that the domain is not in the aligned region.

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