DRSC/TRiP Functional Genomics Resources

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Protein Alignment side-VI and si:ch211-66e2.5

DIOPT Version :9

Sequence 1:NP_001036705.1 Gene:side-VI / 4379854 FlyBaseID:FBgn0083950 Length:1087 Species:Drosophila melanogaster
Sequence 2:XP_001920347.3 Gene:si:ch211-66e2.5 / 100150500 ZFINID:ZDB-GENE-131121-180 Length:302 Species:Danio rerio


Alignment Length:202 Identity:48/202 - (23%)
Similarity:84/202 - (41%) Gaps:26/202 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 ITIDLYLRPLLVEISFNN--QPMSADRKYEIECQAIGSRPPAKIT--WWMGNLELHGHS-QKVSE 299
            :.:.||.:|..|.||..|  .|:...|:|:::|:.....|...:.  |:....|::.|| .:::.
Zfish   100 LNLVLYKKPDSVSISLVNHSSPVVEGREYQLQCEVHNVAPVQYLVLRWYREQTEVYNHSFSELTP 164

  Fly   300 DGNVS-TSVLSITPTREDHGKALSCRATNELVRNG------IRETAMKLNVFFIPTLQLDLGSNL 357
            ...|. :|.|.|.|.|.:.|....|.|..:|...|      :...::.:.|.:.|..:......|
Zfish   165 ATPVQVSSTLLIVPNRAEDGAQYRCEAELQLGPEGPQPPPTVLSPSLNIAVHYPPDFRSPKEEQL 229

  Fly   358 NPEDIEEGDDVYFECKVHANPAAYKVVWKHNHQIIQHNQRAGVIVSSGDLALQGVTRHQAGNYTC 422
               ::.||.:|..:|....||... .:|...:  :|.......::....|:        .|.|||
Zfish   230 ---EVSEGSEVVLDCTAEGNPLPV-YIWTSPN--LQEKADDQPVLKDASLS--------PGVYTC 280

  Fly   423 TASNVEG 429
            ||||:.|
Zfish   281 TASNILG 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-VINP_001036705.1 IG_like 35..140 CDD:214653
Ig_3 157..230 CDD:290638
IG_like 165..242 CDD:214653 0/1 (0%)
Ig 265..343 CDD:299845 18/87 (21%)
IG_like 267..343 CDD:214653 17/85 (20%)
IG_like 363..440 CDD:214653 18/67 (27%)
IGc2 364..429 CDD:197706 17/64 (27%)
IG_like 456..532 CDD:214653
Ig_3 456..524 CDD:290638
fn3 545..622 CDD:278470
si:ch211-66e2.5XP_001920347.3 Ig 108..203 CDD:299845 25/94 (27%)
IG_like 122..196 CDD:214653 17/73 (23%)
IG_like 227..293 CDD:214653 19/75 (25%)
Ig_2 227..284 CDD:290606 16/70 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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