DRSC/TRiP Functional Genomics Resources

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Protein Alignment side-VI and si:ch211-74m13.1

DIOPT Version :9

Sequence 1:NP_001036705.1 Gene:side-VI / 4379854 FlyBaseID:FBgn0083950 Length:1087 Species:Drosophila melanogaster
Sequence 2:XP_001922015.4 Gene:si:ch211-74m13.1 / 100149459 ZFINID:ZDB-GENE-081104-12 Length:328 Species:Danio rerio


Alignment Length:273 Identity:62/273 - (22%)
Similarity:103/273 - (37%) Gaps:50/273 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 SPPPTVIWLMNGQLQNSVVDYTYDG-----------AINSKLVVRNLSRIHQHAVYT--CQASNF 231
            :||..|:...:....|.....|:||           ...:.|:...:|::....:..  |..:  
Zfish    30 NPPKLVVRFNSSASANCNTSVTHDGMGWEATVGGVPLSKANLITWRVSQLTDWKIEPPFCYIN-- 92

  Fly   232 HKKYVATNITIDLYLRPLLVEISFNNQPMSADRKYEIECQAIGSRPPAKIT--WWMGNLELHGHS 294
            :.|.....:.:.:|..|..|.||..||.|:...:||::|......|...:|  |:.|...::   
Zfish    93 YGKQCEVPLPVTIYKTPDSVSISTVNQIMTEGNQYELQCDIHNVAPAQNLTINWYKGETLVN--- 154

  Fly   295 QKVSEDGNVSTSV-----LSITPTREDHGKALSCRATNELVRNGIR------ETAMKLNVFFIPT 348
             :.:...|..:.|     |.|.|.|.|.|....|.....|...|.:      ...:.::|.:.|.
Zfish   155 -QTNFTDNTKSPVNKIIRLLIHPDRADDGAQYRCETELNLGVEGPQPPPKNTSKPLSIDVHYKPQ 218

  Fly   349 LQLDLGSNLNPEDIEEGDDVYFECKVHANPAAYKVVWKHNHQIIQHNQRAGVIVSSGDLALQGVT 413
                  .:.:.|:|.:.|.||..|.|.|||||. ..|...|   ...:.:..::.|..|:     
Zfish   219 ------HSSSAENISQSDTVYLNCTVKANPAAV-YTWHSEH---LKEKISSPVIQSSPLS----- 268

  Fly   414 RHQAGNYTCTASN 426
               .|.|||||:|
Zfish   269 ---PGKYTCTATN 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-VINP_001036705.1 IG_like 35..140 CDD:214653
Ig_3 157..230 CDD:290638 10/62 (16%)
IG_like 165..242 CDD:214653 11/74 (15%)
Ig 265..343 CDD:299845 18/90 (20%)
IG_like 267..343 CDD:214653 17/88 (19%)
IG_like 363..440 CDD:214653 21/64 (33%)
IGc2 364..429 CDD:197706 21/63 (33%)
IG_like 456..532 CDD:214653
Ig_3 456..524 CDD:290638
fn3 545..622 CDD:278470
si:ch211-74m13.1XP_001922015.4 Ig2_ICAM-1_like 109..209 CDD:143232 25/103 (24%)
Ig_2 217..281 CDD:290606 24/80 (30%)
IG_like 230..281 CDD:214653 21/61 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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