DRSC/TRiP Functional Genomics Resources

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Protein Alignment stnB and APM4

DIOPT Version :10

Sequence 1:NP_001036318.2 Gene:stnB / 4379834 FlyBaseID:FBgn0016975 Length:1262 Species:Drosophila melanogaster
Sequence 2:NP_014579.1 Gene:APM4 / 854092 SGDID:S000005423 Length:491 Species:Saccharomyces cerevisiae


Alignment Length:333 Identity:70/333 - (21%)
Similarity:123/333 - (36%) Gaps:69/333 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   898 RERALTYKMEEVQVTAVDEITVEQDFEGKILKQIARVRLFFLAFLTGMPTIELGVND-------- 954
            |.:.:.:|.:||.:...:.|.:....:|.|||......:.....|:|.|....|:||        
Yeast   201 RPKGIIHKKDEVFLYVNERINILVSRDGSILKSYVDGTIDITTHLSGTPICRFGLNDSLGMQSED 265

  Fly   955 --MW-----RQGKEVVGRHDIIPVATEEWIRLEAVEFHSVVNQKEYERTRTIKFQPPDANYIELL 1012
              .|     |......|..:.||.|....:.||..:||..|:..::.|...|:|.|||.: :||:
Yeast   266 EKKWLAQQQRHSGSDFGNKNFIPKAAAGSVLLEDCKFHECVSLDKFNRNHIIEFVPPDGS-MELM 329

  Fly  1013 RFRVRPPKNRELPLQLK--ATWCVSGNKVELRADI--LVPGFTSRKLGQIPCEDVSVRFPIPECW 1073
            ::.||  .|..||.::.  .|.....|:::.|..:  |.||..|.|       ||.:..|:|...
Yeast   330 KYHVR--DNINLPFKVTPIVTHSTRDNEIDYRITLKSLFPGKLSAK-------DVVLHIPVPPST 385

  Fly  1074 IYLFRVEKHFRYGSVKSAHRRTGKIKGIERILGAVDTLQESLIEVTSGQAKYEHHHRAIVWRCPR 1138
            :                                      :..|.|::|..|:.....|::||..:
Yeast   386 V--------------------------------------DCKISVSNGHCKFVPEENAMIWRFNK 412

  Fly  1139 LPKEGQGAYTTHQLVCRMALTSYDQIPSELAPYAFVEFTMPATQVSHTTVRSVSVQDSDGDEPPE 1203
            .  .|....|...:....:.|:...:.....|...:||.:.....|...||..::...|......
Yeast   413 Y--NGLTENTLSAVTVSTSDTTQLNLQQWTRPPISLEFEVMMFSNSGLVVRYFTISGKDSKHRAV 475

  Fly  1204 KYVRYLAR 1211
            |:::|:::
Yeast   476 KWIKYISK 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stnBNP_001036318.2 PRK12323 <356..>549 CDD:481241
AP_MHD_Cterm 897..1219 CDD:472082 70/333 (21%)
APM4NP_014579.1 AP2_Mu_N 1..142 CDD:341440
AP-2_Mu2_Cterm 207..490 CDD:271159 69/327 (21%)
Blue background indicates that the domain is not in the aligned region.

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