DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment stnB and TfIIA-L

DIOPT Version :9

Sequence 1:	NP_001036318.2	Gene:	stnB / 4379834	FlyBaseID:	FBgn0016975	Length:	1262	Species:	Drosophila melanogaster
Sequence 2:	NP_476995.1	Gene:	TfIIA-L / 43284	FlyBaseID:	FBgn0011289	Length:	366	Species:	Drosophila melanogaster

Alignment Length:	377	Identity:	73/377 - (19%)
Similarity:	121/377 - (32%)	Gaps:	132/377 - (35%)

- Green bases have known domain annotations that are detailed below.

  Fly   260 PPPLAAVNPPPAAPEADDLLDMFGTTACKPAKPPPPKSKEDILSLFEQPHVPLSQPASKPDL--L 322
            |||:.|.||                   |..|....|:|:...:.....|..:...:|...|  |
  Fly    66 PPPIVANNP-------------------KSHKAANAKAKKAAAATAVTSHQHIGGNSSMSSLVGL 111

  Fly   323 HDDLDETIGEG-----EPPEQEEPDTEQSNEISSRDEPVFTSLLIRPDESTHDITSQPQAATGLE 382
            ........|.|     .|.:|         |::|::.|.     :.|..:...:..|.|||:..:
  Fly   112 KSSAGMAAGSGIRNGLVPIKQ---------EVNSQNPPP-----LHPTSAASMMQKQQQAASSGQ 162

  Fly   383 RQVNNMA---------------APSGTASTQRATTPDIEITTVEDLPRSDDEDEPEAMQEPETET 432
            ..:..:|               :|:|:||::.      .:.|:: :|.|       |:||.:.
  Fly   163 GSIPIVATLDPNRIMPVNITLPSPAGSASSES------RVLTIQ-VPAS-------ALQENQL-- 211

  Fly   433 KPQIEPDTEPEIVSEH------SPPT--------------------ERLVTQAALVDGELIAA-E 470
                     .:|::.|      |.||                    ::.:..|..:||.|.:: |
  Fly   212 ---------TQILTAHLISSIMSLPTTLASSVLQQHVNAALSSANHQKTLAAAKQLDGALDSSDE 267

  Fly   471 PEPEEMDTGLDFPLASSGQLSANPFASPD-----EEEPNFAPMPAAVANIFAVNDPDSQMETPKA 530
            .|.||.|..:|..  ....|..:.....:     ||||              :|..|...:...|
  Fly   268 DESEESDDNIDND--DDDDLDKDDDEDAEHEDAAEEEP--------------LNSEDDVTDEDSA 316

  Fly   531 PS-HTANIFASDPDEFDAFSAKFDSVKKDNISIMDGFGGSGAITPTGGDA-W 580
            .. .|.|:.....|:......|:....||  .||:..|.......:.||| |
  Fly   317 EMFDTDNVIVCQYDKITRSRNKWKFYLKD--GIMNMRGKDYVFQKSNGDAEW 366

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
stnB	NP_001036318.2	Trypan_PARP	377..496	CDD:114603	29/160 (18%)
stnB	NP_001036318.2	AP_MHD_Cterm	897..1219	CDD:299401
TfIIA-L	NP_476995.1	TFIIA_alpha_beta_like	8..>62	CDD:199899
		TFIIA	11..366	CDD:281188	72/375 (19%)
		TFIIA_alpha_beta_like	<306..366	CDD:199899	14/61 (23%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1533
SonicParanoid	0	0.000	Not matched by this tool.
	1	1.030