DRSC/TRiP Functional Genomics Resources

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Protein Alignment stnB and AP-2mu

DIOPT Version :10

Sequence 1:NP_001036318.2 Gene:stnB / 4379834 FlyBaseID:FBgn0016975 Length:1262 Species:Drosophila melanogaster
Sequence 2:NP_651049.3 Gene:AP-2mu / 42642 FlyBaseID:FBgn0263351 Length:437 Species:Drosophila melanogaster


Alignment Length:436 Identity:91/436 - (20%)
Similarity:164/436 - (37%) Gaps:95/436 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   809 FYKERPGVRPGQVTK---------------AERITNKLTKFAQYAIAGDYEGVKEFGSDLKKLGL 858
            |:.:|..:....|||               .|.:.:...|.::..|..::..:.|...::...|.
  Fly    56 FHIKRANIWLAAVTKQNVNAAMVFEFLLKIIEVMQSYFGKISEENIKNNFVLIYELLDEILDFGY 120

  Fly   859 PVEHAPQSSQLF----KIGSMNYEDMKQFSVCIEEALFKIPALRERALTYKMEEVQVTAVDEITV 919
            |......:.:.|    .|.|...|:..|.:..:...:    ..|...:.|:..|:.:..::.:.:
  Fly   121 PQNTDSGTLKTFITQQGIKSATKEEQMQITSQVTGQI----GWRREGIKYRRNELFLDVLEYVNL 181

  Fly   920 EQDFEGKILKQIARVRLFFLAFLTGMPTIELGVND---MWRQGKEVVGRHDI------IPVATEE 975
            ....:|::|......::...::|:|||..:.|:||   |..:|:.:.|..:.      .||    
  Fly   182 LMSPQGQVLSAHVAGKVVMKSYLSGMPECKFGINDKIVMESKGRGLSGNSEAETSRSGKPV---- 242

  Fly   976 WIRLEAVEFHSVVNQKEYERTRTIKFQPPDANYIELLRFRVRPPKNRELPLQ-LKATWCVSGNKV 1039
             :.::..:||..|...::|...:|.|.|||..: ||:|:|.  .|:..||.: :.....|...|:
  Fly   243 -VVIDDCQFHQCVKLSKFETEHSISFIPPDGEF-ELMRYRT--TKDISLPFRVIPLVREVGRTKM 303

  Fly  1040 ELRADILVPGFTSRKLGQIPCEDVSVRFPIPECWIYLFRVEKHFRYGSVKSAHRRTGKIKGIERI 1104
            |::. :|...|....|||    .:.|:.|.|                                  
  Fly   304 EVKV-VLKSNFKPSLLGQ----KIEVKIPTP---------------------------------- 329

  Fly  1105 LGAVDTLQESLIEVTSGQAKYEHHHRAIVWRCPRLPKEGQGAYTTHQLVCRMALTSYDQIPSELA 1169
               ::|....|| ...|:|||:....||||:..|:    .|...| ||...:.|...|.......
  Fly   330 ---LNTSGVQLI-CLKGKAKYKASENAIVWKIKRM----AGMKET-QLSAEIELLETDTKKKWTR 385

  Fly  1170 PYAFVEFTMP----ATQVSHTTVRSVSVQDSDGDEPPEKYVRYLAR 1211
            |...:.|.:|    ..:|.:..|....:..||.|  ..|:|||:.|
  Fly   386 PPISMNFEVPFAPSGFKVRYLKVFEPKLNYSDHD--VVKWVRYIGR 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stnBNP_001036318.2 PRK12323 <356..>549 CDD:481241
AP_MHD_Cterm 897..1219 CDD:472082 75/329 (23%)
AP-2muNP_651049.3 AP2_Mu_N 1..140 CDD:341440 13/83 (16%)
AP-2_Mu2_Cterm 166..436 CDD:271159 74/322 (23%)
Blue background indicates that the domain is not in the aligned region.

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