DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stnB and GTF2A1L

DIOPT Version :9

Sequence 1:NP_001036318.2 Gene:stnB / 4379834 FlyBaseID:FBgn0016975 Length:1262 Species:Drosophila melanogaster
Sequence 2:NP_006863.2 Gene:GTF2A1L / 11036 HGNCID:30727 Length:478 Species:Homo sapiens


Alignment Length:531 Identity:95/531 - (17%)
Similarity:165/531 - (31%) Gaps:191/531 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 PQSTQDLISTVSSQLDETSSELLGRIPATRSPSPVSMRDLHSPSPTPDSGLADLLDVSVDSGSSA 189
            |..|..|..::...|..:::.|:  |||.|:....:..:|.:                  |.|||
Human    64 PLFTLQLPHSLHQTLQSSTASLV--IPAGRTLPSFTTAELGT------------------SNSSA 108

  Fly   190 H----------TQGIEADLISGVAGGVRLDNPFAVPTAVPNIQAAVPLPATPIKQPPRPPPPRPA 244
            :          ..|:....:||....|.      ||..|........:...||:           
Human   109 NFTFPGYPIHVPAGVTLQTVSGHLYKVN------VPIMVTETSGRAGILQHPIQ----------- 156

  Fly   245 PPRPAPPGQAAPQRPPPPLAAVNPPPAAPEADDLLDMFGTTACKPAKPPPPKSKEDILSLFEQPH 309
                    |...|...|.:...:.|...|     ..:..||          :..:.|.::.:||.
Human   157 --------QVFQQLGQPSVIQTSVPQLNP-----WSLQATT----------EKSQRIETVLQQPA 198

  Fly   310 VPLSQPASKPDLLHDDLDETIGEGEPPEQEEPDTEQSNEISSRDEPVFTSLLIRPDESTH----- 369
            :..|.|..:..|.:...|..:..|                  .:..:....|:...||:|     
Human   199 ILPSGPVDRKHLENATSDILVSPG------------------NEHKIVPEALLCHQESSHYISLP 245

  Fly   370 DITSQPQAATGLERQVNNMAAPSGTASTQR-------ATTP---------DIEITTVED-LPRSD 417
            .:...||.:   :...|..:..||:||..:       :|:|         ||::..::: :...|
Human   246 GVVFSPQVS---QTNSNVESVLSGSASMAQNLHDESLSTSPHGALHQHVTDIQLHILKNRMYGCD 307

  Fly   418 DEDEPEAMQEP------ETETKPQIEPD---TEPEIVSEHSPPTERLVTQAALVDGELIAAEPEP 473
            ...:|..::||      |.::..|::..   |:.:|                   ||:|..:...
Human   308 SVKQPRNIEEPSNIPVSEKDSNSQVDLSIRVTDDDI-------------------GEIIQVDGSG 353

  Fly   474 EEMDTGLDFPLASSGQLSANPFAS---------PDEEEPNFAPMPAAVANIFAVNDPDSQMETPK 529
               ||..:..:.|:.....|.|..         |:||..:.:...:      |.|..|:  |.|:
Human   354 ---DTSSNEEIGSTRDADENEFLGNIDGGDLKVPEEEADSISNEDS------ATNSSDN--EDPQ 407

  Fly   530 APSHTANIFASD-------------PDEFD---AFSAKFDSV----KKDNISIMDG---FGGSGA 571
                 .||...|             ||.||   ....::|.:    .|....:.||   |||...
Human   408 -----VNIVEEDPLNSGDDVSEQDVPDLFDTDNVIVCQYDKIHRSKNKWKFYLKDGVMCFGGRDY 467

  Fly   572 ITPTG-GDA-W 580
            :.... ||| |
Human   468 VFAKAIGDAEW 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stnBNP_001036318.2 Trypan_PARP 377..496 CDD:114603 24/144 (17%)
AP_MHD_Cterm 897..1219 CDD:299401
GTF2A1LNP_006863.2 TFIIA 10..478 CDD:308659 94/529 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 309..427 26/152 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1533
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.030

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