DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RunxA and run

DIOPT Version :10

Sequence 1:NP_001259747.1 Gene:RunxA / 4379817 FlyBaseID:FBgn0083981 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_523424.2 Gene:run / 33059 FlyBaseID:FBgn0003300 Length:510 Species:Drosophila melanogaster


Alignment Length:469 Identity:161/469 - (34%)
Similarity:223/469 - (47%) Gaps:123/469 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SSNSTASNA-NNNNNNTANNNNTSSNNNTTNTNGSSNNNTSGNNNNSSGNNSNTEQNTPPTPAQL 70
            |||:|.::| ..|...:..|.:|.|.::|    |||..:.|.||.:||.|.:.:.||:...|:.:
  Fly    40 SSNATTASAIAINPAQSLANTSTHSASST----GSSTPDLSTNNTSSSSNATTSPQNSAKMPSSM 100

  Fly    71 LNEAYTKMTSDILAERTLGDFLTEHPGELIRTSSPLFVCTVLPPHWRSNKTLPVAFKVVSLGDIM 135
                     :|:.|  :|.:.|.|:.|||.:|.||..:|:.||.||||||:||.||||::|.|:.
  Fly   101 ---------TDMFA--SLHEMLQEYHGELAQTGSPSILCSALPNHWRSNKSLPGAFKVIALDDVP 154

  Fly   136 DGTMVTVRAGNDENYCAELRNCTAVMKNQVAKFNDLRFVGRSGRGKSFTLTITVSTNPPHIATYN 200
            |||:|:::.|||||||.||||||..||||||||||||||||||||||||||||::|.|..||:|:
  Fly   155 DGTLVSIKCGNDENYCGELRNCTTTMKNQVAKFNDLRFVGRSGRGKSFTLTITIATYPVQIASYS 219

  Fly   201 KAIKVTVDGPREPRSKTMLSLLGQQQQFHFAFGQRPFHFSTDPLSGFRMPPIGNCQSASNTHWGY 265
            ||||||||||||||||         |.:.:            |..|...|.:.|.......:..|
  Fly   220 KAIKVTVDGPREPRSK---------QSYGY------------PHPGAFNPFMLNPAWLDAAYMTY 263

  Fly   266 GSAASAYSPYLASSGLSSCTTPTSAQFNNPALGFTCSSNDQSNNQDFGGATNRDCVPMLPDSTAS 330
            |     |:.|......:.     :||.::|||..:.:|:...|                |:.:.:
  Fly   264 G-----YADYFRHQAAAQ-----AAQVHHPALAKSSASSVSPN----------------PNPSVA 302

  Fly   331 DLDQHLSSLVGSTSGQMTHHSLLGAGGQTSISSTVNGAS--GGGSAGAGTAGGGAGSGGGAGGGA 393
                                        ||.||.|..:.  ...:|.|..||..|.......|.|
  Fly   303 ----------------------------TSSSSAVQPSEYPHPAAAVAAAAGQPAAMMPSPPGAA 339

  Fly   394 GGNSILVPRYHTN--------------ASNEYNVHSS------------QNGPRSLSDSS---QA 429
            ......:|::..|              |.:.||..::            |:.|..:|.:|   .:
  Fly   340 PATPYAIPQFPFNHVAAAAAAKAATPHAFHPYNFAAAAGLRARNAALHHQSEPVHVSPASSRPSS 404

  Fly   430 ESPVQED-LLTTNT 442
            .||.|:. ||..||
  Fly   405 SSPTQQHVLLKLNT 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RunxANP_001259747.1 Runt 88..216 CDD:459963 90/127 (71%)
runNP_523424.2 Runt 107..235 CDD:459963 90/127 (71%)

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