Protein Alignment RunxA and rnt-1

DIOPT Version :10

• Sequence 1: NP_001259747.1
• Gene: RunxA / 4379817
• FlyBaseID: FBgn0083981
• Length: 663
• Species: Drosophila melanogaster
• Sequence 2: NP_001370335.1
• Gene: rnt-1 / 172243
• WormBaseID: WBGene00004393
• Length: 301
• Species: Caenorhabditis elegans
• Alignment Length: 295
• Identity: 98/295 - (33%)
• Similarity: 136/295 - (46%)
• Gaps: 44/295 - (14%)

  Fly    90 DFLTEHPG---ELIRTSSPLFVCTVLPPHWRSNKTLPVAFKVVSLGDIMDGTMVTVRAGNDENYC 151
            :|:.:.|.   .|.::|||..:.|.||.||||||:....|.||.|..:.|.|.|::.|||||..|
 Worm    10 NFIEQQPAPAKTLEKSSSPNILYTALPKHWRSNKSFQEPFYVVLLTPVPDNTEVSIWAGNDEKPC 74

  Fly   152 AELRNCTAVMKNQVAKFNDLRFVGRSGRGKSFTLTITVSTNPPHIATYNKAIKVTVDGPREPR-S 215
            .|:||..|.:..|||||||||||||||||:.|.|||.:.:.|..:||....|||||||||:.| .
 Worm    75 EEVRNEKAKVHRQVAKFNDLRFVGRSGRGRKFHLTIVIHSAPMMVATVKNVIKVTVDGPRDARIP 139

  Fly   216 KTMLSLLGQQQQ-------------------------FHFAFGQRPFHFSTDPLSGFRMPPIGNC 255
            |...||..|.:|                         |.....|      |.|.|.|.:...|..
 Worm   140 KPQGSLKRQAEQQTIFPNDIIRTPGPPMPMTMIPPPWFPLPMTQ------TFPPSFFPLISPGPH 198

  Fly   256 QSASNTHWGYGSAASAYSPYLASSGLSSCTTPTSAQFNNPALGFTCSSNDQSNNQDF-------G 313
            .|.|...|...| .|..:|........:.:..||...::|::..|.:|:|:...:..       .
 Worm   199 PSISAALWKIHS-ESMKTPIKQKVEQENVSLNTSTCLSSPSIFITPTSDDRKLKRPSSPRSITKS 262

  Fly   314 GATNRDCVPMLPDSTASDLDQHLSSLVGSTSGQMT 348
            ..|:.:.:...|:|..|...::: |:..|.|...|
 Worm   263 SETSINLIQETPESVESKRRRNV-SITSSNSSSPT 296

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RunxA	NP_001259747.1	Runt	88..216	CDD:459963	66/129 (51%)
rnt-1	NP_001370335.1	Runt	22..137	CDD:459963	63/114 (55%)