DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RunxA and Runx1

DIOPT Version :9

Sequence 1:NP_001259747.1 Gene:RunxA / 4379817 FlyBaseID:FBgn0083981 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_001104491.1 Gene:Runx1 / 12394 MGIID:99852 Length:465 Species:Mus musculus


Alignment Length:475 Identity:175/475 - (36%)
Similarity:220/475 - (46%) Gaps:134/475 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 SNTEQNTPPTPA---QLLNEAY------------TKMTSDILAERTLGDFLTEHPGELIRTSSPL 106
            |.:.:.|||:.|   ..::||.            :|:.|   .:|::.:.|.:|||||:||.||.
Mouse    22 STSRRFTPPSTALSPGKMSEALPLGAPDGGAALASKLRS---GDRSMVEVLADHPGELVRTDSPN 83

  Fly   107 FVCTVLPPHWRSNKTLPVAFKVVSLGDIMDGTMVTVRAGNDENYCAELRNCTAVMKNQVAKFNDL 171
            |:|:|||.|||.|||||:|||||:|||:.|||:|||.|||||||.|||||.||.||||||:||||
Mouse    84 FLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDL 148

  Fly   172 RFVGRSGRGKSFTLTITVSTNPPHIATYNKAIKVTVDGPREPRSKTMLSLLGQQQQFHFAFGQR- 235
            ||||||||||||||||||.||||.:|||::|||:||||||||| :....|..|.:....:|.:| 
Mouse   149 RFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPR-RHRQKLDDQTKPGSLSFSERL 212

  Fly   236 --------------PFHFSTDP--------LSGFRMPPIGNCQSASNTH----WGYGSAASAYSP 274
                          |.|.:..|        .:.|...|....|.|....    |.|..:..    
Mouse   213 SELEQLRRTAMRVSPHHPAPTPNPRASLNHSTAFNPQPQSQMQDARQIQPSPPWSYDQSYQ---- 273

  Fly   275 YLASSGLSSC--TTPTSAQFNNPALGFTCSSNDQSNNQDFGGATNRDCVPMLPDSTASDL----D 333
            ||.|...||.  .||.|.   ..|.|.|..|.:.|:..                |||.||    |
Mouse   274 YLGSITSSSVHPATPISP---GRASGMTSLSAELSSRL----------------STAPDLTAFGD 319

  Fly   334 QHLSSLVGSTSGQMTHHSLLGAGGQTSISSTVNGASGGGSAGAGTAGGGAGSGGGAGGGAGGNSI 398
            ......:.|.|....|:                       .||.|......||.|.|..|..:: 
Mouse   320 PRQFPTLPSISDPRMHY-----------------------PGAFTYSPPVTSGIGIGMSAMSSA- 360

  Fly   399 LVPRYHTNASNEYNVHSSQNGPRSLSDSSQAES-PVQEDLLTTNTPN----LGSTAGGGAAN--G 456
              .||||..            |.....||||:: |.|     |.:|:    .|::||....:  |
Mouse   361 --SRYHTYL------------PPPYPGSSQAQAGPFQ-----TGSPSYHLYYGASAGSYQFSMVG 406

  Fly   457 GAGS---------NAGSGAA 467
            |..|         ||.:|||
Mouse   407 GERSPPRILPPCTNASTGAA 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RunxANP_001259747.1 Runt 95..216 CDD:279225 97/120 (81%)
Runx1NP_001104491.1 Runt 72..193 CDD:307137 97/121 (80%)
RunxI 375..465 CDD:312115 18/57 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 212 1.000 Domainoid score I2765
eggNOG 1 0.900 - - E1_KOG3982
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000993
OrthoInspector 1 1.000 - - mtm8706
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X738
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.870

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