DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-49 and ndufs2

DIOPT Version :9

Sequence 1:NP_001259064.1 Gene:ND-49 / 43798 FlyBaseID:FBgn0039909 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_001018481.2 Gene:ndufs2 / 553672 ZFINID:ZDB-GENE-050522-273 Length:464 Species:Danio rerio


Alignment Length:467 Identity:342/467 - (73%)
Similarity:391/467 - (83%) Gaps:6/467 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 MRRTLIPGLSHLRLRPQLVA---AGSAALTSQETRRGAAKWYPDPEFMKQFSGPVMYPDEVTSLW 66
            |..|::..||.|. ||.::.   ..|.|....:||:  .:|.||.|:::||||.||||....:.|
Zfish     1 MAATMLRSLSRLG-RPSVLLNSNVSSPACALIQTRQ--KQWQPDVEWVEQFSGVVMYPSPSVAKW 62

  Fly    67 TVPPWNSKVTPVEKSVRNLTLNFGPQHPAAHGVLRLVLELDGETVMRADPHIGLLHRGTEKLIEY 131
            |.||||.|..|.:|.:.|||:||||||||||||||||:||.||:|.:.|||||||||||||||||
Zfish    63 TPPPWNDKDPPAQKDLSNLTINFGPQHPAAHGVLRLVMELSGESVKKCDPHIGLLHRGTEKLIEY 127

  Fly   132 KTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIDVPLRAKYIRTLFAEITRILNHIMAVGTHA 196
            |||.|||||||||||||||||||.|||||||||||..|.||::||.||.|:|||:||||.:.|||
Zfish   128 KTYLQALPYFDRLDYVSMMCNEQAYSLAVEKLLNIQAPPRAQWIRVLFGEMTRIMNHIMGITTHA 192

  Fly   197 LDVGALTPFFWLFEEREKMMEFYERVSGARMHAAYIRPGGVSLDMPLGLMDDIYEFASKFAERLD 261
            ||:||:|||||:||||||:.|||||||||||||||:|||||..||||||||||||:...|:.|:|
Zfish   193 LDIGAMTPFFWMFEEREKLFEFYERVSGARMHAAYVRPGGVHQDMPLGLMDDIYEWCKNFSIRID 257

  Fly   262 EVEDVLTTNRIWVQRTEDIGIVTAEEALNYGFSGVMLRGSGIKWDLRKQQPYDAYNLVNFDVPIG 326
            |||::||.||||..||..||::.|||||||||||||||||||||||||.||||.|:.|.||:.||
Zfish   258 EVEEMLTNNRIWKNRTVGIGVIGAEEALNYGFSGVMLRGSGIKWDLRKSQPYDKYDEVEFDMAIG 322

  Fly   327 TKGDCYDRYLCRVEEMRQSLRIIDQCLNQMPAGEIKTDDAKVAPPSRSEMKTSMEALIHHFKLFT 391
            |.||||||||||||||||||||:.||||:||.||||.||||:|||.|||||||||:|||||||:|
Zfish   323 TNGDCYDRYLCRVEEMRQSLRIMHQCLNKMPPGEIKVDDAKIAPPKRSEMKTSMESLIHHFKLYT 387

  Fly   392 QGYQVPPGATYTAIEAPKGEFGVYLISDGSSRPYRCKIKAPGFAHLAALEKIGKQHMLADVVAII 456
            :||||||||||||||||||||||||:|||||||||||||||||||||.|:::.:.||||||||||
Zfish   388 EGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDRMSQGHMLADVVAII 452

  Fly   457 GTLDVVFGEIDR 468
            ||.|:||||:||
Zfish   453 GTQDIVFGEVDR 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-49NP_001259064.1 PRK06075 79..468 CDD:180385 309/388 (80%)
NuoD 79..468 CDD:223722 309/388 (80%)
ndufs2NP_001018481.2 NuoD 76..464 CDD:223722 309/387 (80%)
PRK06075 77..464 CDD:180385 308/386 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581944
Domainoid 1 1.000 466 1.000 Domainoid score I445
eggNOG 1 0.900 - - E1_COG0649
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56659
Inparanoid 1 1.050 709 1.000 Inparanoid score I632
OMA 1 1.010 - - QHG60638
OrthoDB 1 1.010 - - D212488at33208
OrthoFinder 1 1.000 - - FOG0003234
OrthoInspector 1 1.000 - - oto41538
orthoMCL 1 0.900 - - OOG6_101051
Panther 1 1.100 - - LDO PTHR11993
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3933
SonicParanoid 1 1.000 - - X2189
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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