DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-49 and ND-49L

DIOPT Version :9

Sequence 1:NP_001259064.1 Gene:ND-49 / 43798 FlyBaseID:FBgn0039909 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_651392.2 Gene:ND-49L / 43073 FlyBaseID:FBgn0039331 Length:523 Species:Drosophila melanogaster


Alignment Length:432 Identity:285/432 - (65%)
Similarity:345/432 - (79%) Gaps:10/432 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 WYPDPEFMKQFSGPVMYP--DEVTSLWTVPPWNSK---VTPVEKSVRNLTLNFGPQHPAAHGVLR 101
            ||||||||.:....|.||  ||    |...| |.|   :.||:::.|...:||||.|||||||||
  Fly    97 WYPDPEFMNKQQYIVWYPEGDE----WKKRP-NFKGKQIPPVDRTFRTKLINFGPAHPAAHGVLR 156

  Fly   102 LVLELDGETVMRADPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNI 166
            ::||||.|||:.|||||||||||||||||||||||||||||||||||.|.||..|.||||||||:
  Fly   157 MILELDNETVLNADPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSCMANELAYCLAVEKLLNV 221

  Fly   167 DVPLRAKYIRTLFAEITRILNHIMAVGTHALDVGALTPFFWLFEEREKMMEFYERVSGARMHAAY 231
            :||.|||||||:|:||.|:.||.||:|:..||.||:||.|||||||||:.||.||.||||:||||
  Fly   222 EVPRRAKYIRTMFSEIMRLTNHTMAIGSSVLDCGAITPLFWLFEEREKLYEFSERASGARLHAAY 286

  Fly   232 IRPGGVSLDMPLGLMDDIYEFASKFAERLDEVEDVLTTNRIWVQRTEDIGIVTAEEALNYGFSGV 296
            ||||||:.|:|||.:.|:|:|.::|.|||||||||:|.||||..|...||:::|.:|||||.:|.
  Fly   287 IRPGGVASDIPLGFLHDLYQFINQFNERLDEVEDVVTDNRIWRMRNIGIGVISAHDALNYGCTGP 351

  Fly   297 MLRGSGIKWDLRKQQPYDAYNLVNFDVPIGTKGDCYDRYLCRVEEMRQSLRIIDQCLNQMPAGEI 361
            :||.:|:|||||||||||||:.::|||.:|:.||||||||.|:.|||:|:.||.||::.||.|||
  Fly   352 VLRATGVKWDLRKQQPYDAYDEMDFDVVVGSNGDCYDRYLVRMREMRESVNIIKQCIDAMPPGEI 416

  Fly   362 KTDDAKVAPPSRSEMKTSMEALIHHFKLFTQGYQVPPGATYTAIEAPKGEFGVYLISDGSSRPYR 426
            |.||.|:.||.||:||..||.||||||.|:||::||||.||.|:|:||||||.:|||||||||||
  Fly   417 KVDDLKICPPQRSKMKEGMEDLIHHFKHFSQGFRVPPGQTYCAVESPKGEFGAFLISDGSSRPYR 481

  Fly   427 CKIKAPGFAHLAALEKIGKQHMLADVVAIIGTLDVVFGEIDR 468
            |||:...:||||.:.|:...|:|||||||||:||:|||||||
  Fly   482 CKIRPASYAHLALMAKMAPAHLLADVVAIIGSLDIVFGEIDR 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-49NP_001259064.1 PRK06075 79..468 CDD:180385 264/388 (68%)
NuoD 79..468 CDD:223722 264/388 (68%)
ND-49LNP_651392.2 PRK06075 142..523 CDD:180385 263/380 (69%)
NuoD 142..523 CDD:223722 263/380 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450255
Domainoid 1 1.000 207 1.000 Domainoid score I93
eggNOG 1 0.900 - - E1_COG0649
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 309 1.000 Inparanoid score I78
Isobase 1 0.950 - 0 Normalized mean entropy S1889
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D212488at33208
OrthoFinder 1 1.000 - - FOG0003234
OrthoInspector 1 1.000 - - otm51367
orthoMCL 1 0.900 - - OOG6_101051
Panther 1 1.100 - - P PTHR11993
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2189
1211.750

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