DRSC/TRiP Functional Genomics Resources

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Protein Alignment Thd1 and tdg.1

DIOPT Version :9

Sequence 1:NP_001259060.1 Gene:Thd1 / 43796 FlyBaseID:FBgn0026869 Length:1738 Species:Drosophila melanogaster
Sequence 2:NP_001018587.1 Gene:tdg.1 / 553789 ZFINID:ZDB-GENE-050522-44 Length:441 Species:Danio rerio


Alignment Length:462 Identity:165/462 - (35%)
Similarity:226/462 - (48%) Gaps:105/462 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   644 MGEELH---MHSPS----------HRHLDAVTT-----GPGRYGILVSNDTPECLSREMYRHSQQ 690
            |.|.|:   .|:||          .:||..:..     ..|..|.::.....:...::|..|.:.
Zfish     1 MDERLYGSLPHAPSEYLQQWVQSAQQHLQTLQAQYPHMANGSAGFMMEGQREDAGMQQMPVHPED 65

  Fly   691 STTV--------------LEQTDSSSCGINFKPMPK-------KRGRKKKLVAVNADTSQMTTPV 734
            :..:              ..||       |.:|.||       |.|.|.|    .|...:...|.
Zfish    66 AAQLQPAAAQTAPAKGKRARQT-------NKEPKPKGEPKPRAKPGPKPK----KAKEDKEAPPA 119

  Fly   735 D-QQKVSAGRADCEDGGGDQAAKPKERKKHDRFNGMSEEEVIKRTIPDHLCDNLDIVIVGINPGL 798
            : |:|:            |:..| |.::|.|||.|||||||:|||:||.|..|||.||:||||||
Zfish   120 EGQEKI------------DETFK-KVKRKVDRFKGMSEEEVMKRTLPDILIPNLDYVIIGINPGL 171

  Fly   799 FAAYKGHHYAGPGNHFWKCLYLAGLTQEQMSADEDHKL-IKQGIGFTNMVARATKGSADLTRKEI 862
            .|||.|..:.||||||||||:|:|.|::.::..:|..| .|.||||||||||||.||.||:.||:
Zfish   172 MAAYIGRWFPGPGNHFWKCLFLSGFTEKLLNHMDDQSLPEKYGIGFTNMVARATPGSKDLSSKEL 236

  Fly   863 KEGSRILLEKLQRFRPKVAVFNGKLIFEVFS----GK--KEFHFGRQPDRVDGTDTFIWVMPSSS 921
            :||.:||:||:::|:|.:||||||.|:|:|.    ||  |...||.||.::..:||.:::|||||
Zfish   237 REGGKILVEKIKQFKPLIAVFNGKCIYEMFCRELFGKKPKTLEFGLQPHKIPDSDTALYLMPSSS 301

  Fly   922 ARCAQLPRAADKVPFYAALKKFRDFLNGQIPHIDESECVFT-------DQRIRLCSAQQQVDIVG 979
            |||||.|||.|||.||..|::.||.|.|.|...:..|..:|       :...|:...::|.|   
Zfish   302 ARCAQFPRAQDKVHFYIKLRELRDQLKGVIKQKEVEEVNYTFDLGLAKEDAKRIAVKEEQYD--- 363

  Fly   980 KINKTHQPPLGDHPSSLTVVSNCSG---PIAGDAE--CGIVAEESDQVQSEKMIPQMDPTVPSS- 1038
                         |..........|   |..|.:.  |...|.|.:...:||.     ||.||. 
Zfish   364 -------------PGYEAAFGGAYGEAAPEGGQSNGICNFSASEENANTAEKA-----PTKPSDV 410

  Fly  1039 SNATDGK 1045
            ....||:
Zfish   411 GQVQDGQ 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Thd1NP_001259060.1 UDG_like 714..962 CDD:294330 127/255 (50%)
tdg.1NP_001018587.1 UDG_like <114..357 CDD:294330 125/255 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594883
Domainoid 1 1.000 173 1.000 Domainoid score I3647
eggNOG 1 0.900 - - E1_COG3663
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006159
OrthoInspector 1 1.000 - - otm24883
orthoMCL 1 0.900 - - OOG6_104831
Panther 1 1.100 - - O PTHR12159
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1493
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1110.730

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