DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tdg and tdg

DIOPT Version :10

Sequence 1:NP_651925.1 Gene:Tdg / 43796 FlyBaseID:FBgn0026869 Length:1738 Species:Drosophila melanogaster
Sequence 2:NP_001004982.1 Gene:tdg / 448432 XenbaseID:XB-GENE-1006128 Length:441 Species:Xenopus tropicalis


Alignment Length:505 Identity:175/505 - (34%)
Similarity:235/505 - (46%) Gaps:127/505 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   538 PENQDDGYETSAGDVLTPNSHSSSTHSIT--PQHQMQHSNIVLMTQNQKKSDDLQLTKVTLSGEA 600
            |.|.|.|.|            ..:.|.:|  |.|::|                      ..||.|
 Frog    30 PSNMDLGNE------------QQTLHPLTGVPAHELQ----------------------AFSGMA 60

  Fly   601 HTDPNACSSNSSQGQVLASQSHLELSEGTRCSSHASVVDPYSFMGEELHMHSPSHRHLDAVTTGP 665
            ..:|          |||.:.:.::..|..........:.|.....|.              |||.
 Frog    61 ANEP----------QVLHTLTGVQAQEPINGEMQVPEMIPNLAEAEP--------------TTGK 101

  Fly   666 GRYGILVSNDTPECLSREMYRHSQQSTTVLEQTDSSSCGINFKPMPKKRGRKKKLVAVNADTSQM 730
            .:.|...|...|:                 :|...|:      ..||..|:::|:    .||.  
 Frog   102 RKRGKAPSEPKPK-----------------KQAAKSA------KAPKSSGKQEKI----TDTF-- 137

  Fly   731 TTPVDQQKVSAGRADCEDGGGDQAAKPKERKKHDRFNGMSEEEVIKRTIPDHLCDNLDIVIVGIN 795
                                       |.::|.|||||:||.|::.:|:||.|..||||||:|||
 Frog   138 ---------------------------KVKRKVDRFNGVSEAELMTKTLPDILTFNLDIVIIGIN 175

  Fly   796 PGLFAAYKGHHYAGPGNHFWKCLYLAGLTQEQMSADEDHKL-IKQGIGFTNMVARATKGSADLTR 859
            |||.||||||||.||||||||||:|:||:..|::..:||.| .|.||||||||.|.|.||.||:.
 Frog   176 PGLMAAYKGHHYPGPGNHFWKCLFLSGLSDMQLNHLDDHSLPEKYGIGFTNMVERTTPGSKDLSS 240

  Fly   860 KEIKEGSRILLEKLQRFRPKVAVFNGKLIFEVFSGK------KEFHFGRQPDRVDGTDTFIWVMP 918
            ||.:||.||||||||:::|:||.||||.|:|:||.:      |:|.||.||.||..|||..:|||
 Frog   241 KEFREGGRILLEKLQKYKPRVAAFNGKCIYEIFSKEIFGVKIKKFEFGIQPHRVPETDTVCYVMP 305

  Fly   919 SSSARCAQLPRAADKVPFYAALKKFRDFLNGQIPHIDESECVFT-DQRIRLCSAQQQVDIVGKIN 982
            ||||||||.|||.|||..|..||:.|:.|.|.....:..|..:: |.::....|::|.....|.:
 Frog   306 SSSARCAQFPRAQDKVHHYIKLKELRNQLKGVESSREVQEVQYSFDLQLAQADAKRQAIKEEKYD 370

  Fly   983 KTHQPPLGDHPSSLTVVSNCSG--PIAGDAECGIVAEESDQVQSEKMIPQ 1030
            ..:....|:..:..| .|..||  ..:.||......|.:.|.|:.:.|||
 Frog   371 PGYNEATGEQFNEQT-TSGESGMCNFSTDATVSSNPEFNGQGQNGQWIPQ 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TdgNP_651925.1 UDG-like 714..962 CDD:444933 128/254 (50%)
motif A 793..797 CDD:381679 3/3 (100%)
tdgNP_001004982.1 UDG-like 2..364 CDD:444933 161/447 (36%)
motif A 173..177 CDD:381679 3/3 (100%)

Return to query results.
Submit another query.