DRSC/TRiP Functional Genomics Resources

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Protein Alignment Thd1 and tdg

DIOPT Version :9

Sequence 1:NP_001259060.1 Gene:Thd1 / 43796 FlyBaseID:FBgn0026869 Length:1738 Species:Drosophila melanogaster
Sequence 2:NP_001004982.1 Gene:tdg / 448432 XenbaseID:XB-GENE-1006128 Length:441 Species:Xenopus tropicalis


Alignment Length:505 Identity:175/505 - (34%)
Similarity:235/505 - (46%) Gaps:127/505 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   538 PENQDDGYETSAGDVLTPNSHSSSTHSIT--PQHQMQHSNIVLMTQNQKKSDDLQLTKVTLSGEA 600
            |.|.|.|.|            ..:.|.:|  |.|::|                      ..||.|
 Frog    30 PSNMDLGNE------------QQTLHPLTGVPAHELQ----------------------AFSGMA 60

  Fly   601 HTDPNACSSNSSQGQVLASQSHLELSEGTRCSSHASVVDPYSFMGEELHMHSPSHRHLDAVTTGP 665
            ..:|          |||.:.:.::..|..........:.|.....|.              |||.
 Frog    61 ANEP----------QVLHTLTGVQAQEPINGEMQVPEMIPNLAEAEP--------------TTGK 101

  Fly   666 GRYGILVSNDTPECLSREMYRHSQQSTTVLEQTDSSSCGINFKPMPKKRGRKKKLVAVNADTSQM 730
            .:.|...|...|:                 :|...|:      ..||..|:::|:    .||.  
 Frog   102 RKRGKAPSEPKPK-----------------KQAAKSA------KAPKSSGKQEKI----TDTF-- 137

  Fly   731 TTPVDQQKVSAGRADCEDGGGDQAAKPKERKKHDRFNGMSEEEVIKRTIPDHLCDNLDIVIVGIN 795
                                       |.::|.|||||:||.|::.:|:||.|..||||||:|||
 Frog   138 ---------------------------KVKRKVDRFNGVSEAELMTKTLPDILTFNLDIVIIGIN 175

  Fly   796 PGLFAAYKGHHYAGPGNHFWKCLYLAGLTQEQMSADEDHKL-IKQGIGFTNMVARATKGSADLTR 859
            |||.||||||||.||||||||||:|:||:..|::..:||.| .|.||||||||.|.|.||.||:.
 Frog   176 PGLMAAYKGHHYPGPGNHFWKCLFLSGLSDMQLNHLDDHSLPEKYGIGFTNMVERTTPGSKDLSS 240

  Fly   860 KEIKEGSRILLEKLQRFRPKVAVFNGKLIFEVFSGK------KEFHFGRQPDRVDGTDTFIWVMP 918
            ||.:||.||||||||:::|:||.||||.|:|:||.:      |:|.||.||.||..|||..:|||
 Frog   241 KEFREGGRILLEKLQKYKPRVAAFNGKCIYEIFSKEIFGVKIKKFEFGIQPHRVPETDTVCYVMP 305

  Fly   919 SSSARCAQLPRAADKVPFYAALKKFRDFLNGQIPHIDESECVFT-DQRIRLCSAQQQVDIVGKIN 982
            ||||||||.|||.|||..|..||:.|:.|.|.....:..|..:: |.::....|::|.....|.:
 Frog   306 SSSARCAQFPRAQDKVHHYIKLKELRNQLKGVESSREVQEVQYSFDLQLAQADAKRQAIKEEKYD 370

  Fly   983 KTHQPPLGDHPSSLTVVSNCSG--PIAGDAECGIVAEESDQVQSEKMIPQ 1030
            ..:....|:..:..| .|..||  ..:.||......|.:.|.|:.:.|||
 Frog   371 PGYNEATGEQFNEQT-TSGESGMCNFSTDATVSSNPEFNGQGQNGQWIPQ 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Thd1NP_001259060.1 UDG_like 714..962 CDD:294330 128/254 (50%)
tdgNP_001004982.1 UDG_like 2..364 CDD:320999 161/447 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 196 1.000 Domainoid score I3072
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006159
OrthoInspector 1 1.000 - - oto103325
Panther 1 1.100 - - LDO PTHR12159
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1493
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.040

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