DRSC/TRiP Functional Genomics Resources

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Protein Alignment bip2 and MESR4

DIOPT Version :9

Sequence 1:NP_651923.2 Gene:bip2 / 43793 FlyBaseID:FBgn0026262 Length:1406 Species:Drosophila melanogaster
Sequence 2:NP_001097359.1 Gene:MESR4 / 36986 FlyBaseID:FBgn0034240 Length:2171 Species:Drosophila melanogaster


Alignment Length:1761 Identity:311/1761 - (17%)
Similarity:530/1761 - (30%) Gaps:626/1761 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 IGYSC-TLSAPLELLQDILQKFVQEFARDMHRHMEHANRIEPNLKDARLSIKNLSINVQELLDYI 85
            :|.:| |..:|   .:|:::   ||...|....::     ||.         ::|:|.|    ::
  Fly   141 LGANCLTTGSP---SKDLVK---QELVEDKSEELK-----EPT---------SISLNEQ----FL 181

  Fly    86 GNVEPVGFIRDVPQFPIGKSVNMNFLKPGSAETLTRPVYIFEYLPPMQDPELREIPADVQKEFSE 150
            .::|....:.|       ||.::       :||      ..|:|...::.....:.|:.:.|..|
  Fly   182 DDIELKTEVED-------KSDSL-------SET------HMEFLTDSEEQPSESLGANHESEIDE 226

  Fly   151 KQEFCSKAEYSSTNAADK-LGAKHIDS-------ISPNTVINFRSNAFELDVGS----SVREMSS 203
            |.:.....|..|....|| ..:.:.||       :....|||..:::   :.|.    |:::..|
  Fly   227 KVDHFQPKESDSNEVEDKYFQSANEDSESEIEETVYTPPVINLETDS---ESGDKEFISIKDNES 288

  Fly   204 VVM---------TTGGFISPAIEGKLPEDIIPDIVEKFLGLDAPFSPTIIVNSLQ-----KSPQL 254
            .|:         .|.|.:..|..|:......|::       |...|.||.|.||:     .||.|
  Fly   289 PVLEIEGGTEKSQTSGDLYQADVGEYASTAPPEV-------DETTSQTIGVPSLEGSDTLDSPSL 346

  Fly   255 ALSDRDKTVNPRKIIPSETKIFKQNAALLTSGHSESSIIYASNNHTMLTVTTPKKN--RKQKHDL 317
            .: |.|...:.....|:..||   .:.:....||:|..:   ..||:..|...|.|  .|...:.
  Fly   347 TM-DVDLPCSEDGAPPNVIKI---ESDMEDEAHSDSVKL---KEHTVEVVPLIKLNGAHKALKEE 404

  Fly   318 ICEPGQSELLTNPFEKAQEKSQRKALKMYKQTSKNQRDSSINQIQNM--------KKLKKKFNRG 374
            ..|.|:.|.:.:|.|:.::..::..:..:...:..:.|::.:|:..:        .:.:...:|.
  Fly   405 KLEDGEVEEVEDPGEELEDPKEQSVITNHTGNNTKEEDTTASQVSALPLILPVGTTRSRSISSRS 469

  Fly   375 SF------------DPNKKH----------LEKIFKKQSKLKQNDLQLDIDEKHF-----LQNSQ 412
            |.            .|..:|          |::...|.|.:.|.:.|..::...|     ||..|
  Fly   470 STVSSASQPHLVIDHPESEHNAKPPALKLSLKRRRSKSSSVSQPEKQTKVEAGGFVSSLLLQRLQ 534

  Fly   413 TTSGLAIKANSNE----------------------NALQADIPSQPPTVTSQI----ENNFR--- 448
            :.|.:...|.|.|                      |..||.........:||:    |..||   
  Fly   535 SNSNVIPPAISTESQQVLSCAKCNLQFDFERFQELNKHQAQCSGIQSANSSQLSQKQERFFRCSQ 599

  Fly   449 --------------------------NSIYP---------------------------------- 453
                                      |.:||                                  
  Fly   600 CCSVHQCWHFFLHMREVHRRYICLYCNHVYPSVEKLSLHLENKHDIDQSHFAKDAWDQQQSKEDR 664

  Fly   454 ---------------------------VQPSVI--QQTQVLLAEKKSGSEPERSKLDIFKKISKP 489
                                       :||..:  |:...::..|.:..:|.:.:    :|:.:|
  Fly   665 ARHLVCCTCQATFVQGSEFEDHDCSQLMQPCALCNQKGGHIIGCKNNKRKPTKRR----RKVRRP 725

  Fly   490 RTPRPDIGATLVPPGTGVSVFGSTMT-------------PSALISLPSGTTITPTPSLGLNSENK 541
            ..|...:....|.....|......:.             |:..|..|......|.|.:    ...
  Fly   726 PEPPLPVSQEAVEQPVPVEAIPEQLPQQLHLQSDIQNPFPAENIPAPEPVEDPPAPPI----PKL 786

  Fly   542 NVPSMKINPCNIFDGTIPL-------------TKAGVEMSI--------IDSPKPKKRGRKPGGK 585
            .||.:.:.....|..::..             |...||.::        .|:|.|..........
  Fly   787 VVPKIMLRVPKEFQKSVDAALSSTDTEDEELETAQPVEEAVSAPPEDLPFDAPPPPPPALSYDDS 851

  Fly   586 NVIKQTNVVSQPLINK--VERKKSS---------------------QAITLPLSSSPMIITQSSL 627
            ...|...|:::....|  :||.|:.                     |.:..|....|....|...
  Fly   852 TSSKLNRVLAELERTKLDIERTKADIITKKQSKIIMANAHLENVVPQVVDPPQHLQPQQEEQRRW 916

  Fly   628 NVSPPTEP-LNLCNTEQPSNNFLSNLYAKEKKDRKKYKSLPENVMQLDKSC-SPEK------AST 684
            :::||..| .|..|..:|....::..  :.:.|..:..||..:.|.:|.|. :||.      ...
  Fly   917 SLTPPASPHNNHVNLPEPPPALITEF--QGQPDAVRRNSLGSDCMDMDDSLNAPEMEGSRDFTEA 979

  Fly   685 LHNSIRPTKQNNDVQCSDKFVTISNALSNASIYPGIQTGMVPLLPLLQFPPRPGLIPTGPG---- 745
            ...::.|...:.|.|.:|:.:.|.                    ||   ||..|::..||.    
  Fly   980 QKETLEPAPPSQDTQTADEPLAIQ--------------------PL---PPADGIMVAGPDTHTV 1021

  Fly   746 -------------------LFPAVTGLVGFGNHGNRIPI---------------SPFIDYPGPEE 776
                               ...:|..|..:.||..||.:               :..:|....||
  Fly  1022 DLQLDRPLDRFSMVDFVRLCLKSVYSLCLYCNHARRIAVNVKQLVIHLIGQHRFTATVDSITAEE 1086

  Fly   777 SVADTVRCPPIKDSPVTDSDQFLSRSSTQTDLQMDRNYCNVAPLVPDSMKFAECKSVSCASTILE 841
            ..|:|:         |.....||.        .::..|.|.|               ||.|  ||
  Fly  1087 LYAETI---------VAKLKSFLP--------NLENEYMNAA---------------SCCS--LE 1117

  Fly   842 NPSAQATSKINTKPLLEASGNPDDPIE------------VSDDSDESMHNRQM--------VQRK 886
            |                  |...:|..            .|...:...|||::        |..:
  Fly  1118 N------------------GKYVEPFNERIYECFTCRFVTSTHKELYTHNRRLHIKSNITCVMCQ 1164

  Fly   887 TPISS---------PTYVKTSFAELN-----------PSSFTSAASNGEEKSKMDL-----RNIV 926
            |...|         |..|..|..:|.           ||:|.......::....|:     ::..
  Fly  1165 TNFYSYSEILCHICPGEVAGSVYDLQFRCCLCDMAPLPSAFRLMVHLRKQHQACDICLEDCQSQS 1229

  Fly   927 SLSSNEPLKKFKKLV---------KQSFPDVKSVPHTPAS---------------HSSFPQFNLP 967
            .|||:....|...|.         ||.........|...|               |...|....|
  Fly  1230 KLSSHVWKHKLLHLCYRCGIAYRNKQDISKHLFWKHGTESAGCKQCLQKRWRHVYHFCVPPAEFP 1294

  Fly   968 NFMGGDKFSLAGGADLIPLSRVSDSEY------------SSKIV---PFSSLGGTIPNQIKISEE 1017
            ....|..||.|...::.......|..|            |.|::   ..|.:...:|..:.:.:.
  Fly  1295 CEQCGFVFSKAIYLEVHQRMHTGDFRYACTEEGCEEKFVSRKLLLKHASSHVAKELPQAVSVEQT 1359

  Fly  1018 HNIFSTFSNYEDITITPTGLTSLEPKMRKHHKKLKKVKEGKNKKKKEKKDKSKKAD-QIGLPSFK 1081
            .:...| ...|||   ...|...|.:....|.:.|.:.|.....:..||::|.:.| .|..|..|
  Fly  1360 ADAAPT-EKLEDI---KEELEEGEDEKEGAHNQEKLLSESLTNNETPKKEESDRIDNSIEPPLSK 1420

  Fly  1082 SDRKIKANDKRQKKEKKKDKDKQILVHIPDDTEEFDKVPLANNDEPVLKSSSMTINPSLGAATSG 1146
            |:     |.||:||.|:..:..:.|..|..:..|.|....:::|.|   .||....|.| ...|.
  Fly  1421 SE-----NRKRRKKSKRNKESLEDLNLIAPNLSESDSSDDSDSDAP---RSSHQEQPKL-PMRSS 1476

  Fly  1147 ISPNQIPKLTL---------KLSGKSTLFSSSEKEMTDAGKLK---------------------- 1180
            :....:||:.|         :|.|||.|....||.:..:.:.|                      
  Fly  1477 VDDLDMPKVMLSPSSESDADELDGKSKLEDKEEKPLDGSTEEKALDADDELEPKKEEDQVDVSIW 1541

  Fly  1181 ------QTTILSSEN--KKRERDNSPELARFSPLVTGPPKNKQSETLHLGNSSTAV-----LPVP 1232
                  |...:..|.  |..||::|        ||..||..     ||:..|....     .|.|
  Fly  1542 KNLLQNQAVAIPEEQAVKDEEREDS--------LVNLPPAK-----LHVAWSDHDYCKLYRTPAP 1593

  Fly  1233 SPVAVRAVQLPVSQTSSNSAGWLSNPNNSNTASSTLSASSVLLPQQLMLAPHTIMNNFVPAMCNS 1297
            |||..::......:|...:|.  |:.::|:::||:.|.||                   ...|.|
  Fly  1594 SPVKQKSANKSSIKTPGENAS--SDSDSSSSSSSSDSDSS-------------------SCSCGS 1637

  Fly  1298 TGTVSKSGLCSSPPNTSEENAN-------------AMQIAESSRPSSYVDAEGNRIWICPACGKV 1349
            ..:.|.|...||..|:.:.:::             ::::.:||. |..:|..|..     ...:|
  Fly  1638 NCSCSSSNSSSSSGNSDDSDSSTARGSPQKRSRKKSLKVKKSSE-SLKIDQNGQN-----EQNQV 1696

  Fly  1350 DDGSAM 1355
            :|.:|:
  Fly  1697 EDTTAV 1702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bip2NP_651923.2 BTP 4..80 CDD:128846 12/58 (21%)
PHD_TAF3 1342..1387 CDD:276997 3/14 (21%)
MESR4NP_001097359.1 C2H2 Zn finger 1272..1288 CDD:275368 1/15 (7%)
C2H2 Zn finger 1295..1315 CDD:275370 4/19 (21%)
C2H2 Zn finger 1323..1341 CDD:275370 2/17 (12%)
PHD_ING 2110..2156 CDD:276980
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5034
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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