DRSC/TRiP Functional Genomics Resources

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Protein Alignment Taf3 and taf8

DIOPT Version :10

Sequence 1:NP_651923.2 Gene:Taf3 / 43793 FlyBaseID:FBgn0026262 Length:1406 Species:Drosophila melanogaster
Sequence 2:NP_588062.1 Gene:taf8 / 2539131 PomBaseID:SPCC1259.06 Length:222 Species:Schizosaccharomyces pombe


Alignment Length:219 Identity:49/219 - (22%)
Similarity:81/219 - (36%) Gaps:51/219 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VVAQITQTIGYSCTLSAPLELLQDILQKFVQEFARDMHRHMEHANRIEPNLKDARLSIKNLSINV 78
            |:|.|.|.:|:.....|......:.:.|:::...|::..|.:.:....|..||..|.:..|:|.:
pombe     4 VIANILQQLGFDSMTKAAEASFVEAVDKYLRNSFRELALHTQLSKHTIPTTKDVALWLNLLNIPM 68

  Fly    79 QEL------------------LDYIGNVEPVGFIRDVP-QFPIGKSVNMNFLKPGS-AETLTRPV 123
            ..|                  ||.:.|..     :|:| :|.......|.....|| |.:..||.
pombe    69 SSLQTELEKYLKPLPPAINDELDRLANES-----QDIPSKFKSSLDSKMVSQLLGSLAVSQNRPA 128

  Fly   124 YIFEYLPP-------MQDPELREIPADVQKEFSEKQ--EFCSKAEYSSTNAADKLGAKHIDSISP 179
            |:..:|||       |..|.....|.      |.||  |..::....:.:|..|:    ::...|
pombe   129 YVVNHLPPFPASHTYMATPVYPVRPT------SPKQIRELATQESRLAEHALRKI----LNVNQP 183

  Fly   180 NTVINFRSNAFE-------LDVGS 196
            .:..:.|..:||       |||.|
pombe   184 RSADSPRHASFEKACSELNLDVSS 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Taf3NP_651923.2 HFD_TAF3 4..95 CDD:467041 19/98 (19%)
TNG2 <1289..1387 CDD:227367
PHD_TAF3 1342..1387 CDD:276997
taf8NP_588062.1 HFD_SF 1..59 CDD:467021 12/54 (22%)
TAF8_C 129..177 CDD:431262 12/53 (23%)
Blue background indicates that the domain is not in the aligned region.

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