DRSC/TRiP Functional Genomics Resources

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Protein Alignment bip2 and taf-8

DIOPT Version :9

Sequence 1:NP_651923.2 Gene:bip2 / 43793 FlyBaseID:FBgn0026262 Length:1406 Species:Drosophila melanogaster
Sequence 2:NP_001022514.1 Gene:taf-8 / 174524 WormBaseID:WBGene00006390 Length:497 Species:Caenorhabditis elegans


Alignment Length:324 Identity:63/324 - (19%)
Similarity:120/324 - (37%) Gaps:95/324 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   888 PISSP-TYVKTSFAELNPSSFTSAASNGEEKSKMDLRNIVS-LSSNEP----LKKFKKL----VK 942
            |:..| ||:||..:|....|:........:|.:..:.::|: :..|.|    .:.|:::    ||
 Worm   190 PLPDPHTYIKTEISEDIDFSYEKVREAMSQKKRNGITSLVNYMIRNYPSICLFRNFEEIIHEQVK 254

  Fly   943 QSF---PDVKSVPHTPASHSSFPQFNLPNFMGGDKFSLAGGADLIPLSRVSDSEYSSKIVPFSSL 1004
            ::|   .:.|.:.....:.....|.|                |:..:..||.|.|...::....|
 Worm   255 KTFNKESEEKRMQEAFVAFRDLVQTN----------------DIDEVKNVSKSLYDKGLISKHEL 303

  Fly  1005 -GGTIPNQIKISEEHNIFSTFSNYEDITITPTGLTSLEPKMR------------------KHHKK 1050
             .||  ..:.:|.:..:...|.  |.:.::.|....||.|.|                  ::|..
 Worm   304 QSGT--EVLCMSSDGALIDQFG--ERVYLSETTSIDLEDKDRVSKSSTRMTTCGDGAESLRYHWP 364

  Fly  1051 L-------------------KKVKEGKNKKKKEKKDKSKKADQIGLPSF--KSDRKIKANDKRQK 1094
            :                   :|:.|.|..::|...:...:...|.:|||  ::...:.::|.:.:
 Worm   365 IDEMLDELIELDSCTMDLGDEKIDEMKYMQEKTTFEYLPEWCHILIPSFEHRAYLTVVSDDLKAE 429

  Fly  1095 KEKKKDKDKQILVHIPDDTEEFDK----------------VPLANN------DEPVLKSSSMTI 1136
            :|.||||||:....|.|.|||..|                .|:.:|      ||.:.:.|::.:
 Worm   430 EESKKDKDKEKDKQIGDLTEEEKKGKDEEIFQTHENLYLCPPIRDNDYGNYEDEEITEESALEV 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bip2NP_651923.2 BTP 4..80 CDD:128846
PHD_TAF3 1342..1387 CDD:276997
taf-8NP_001022514.1 BTP 66..142 CDD:128846
TAF8 182..235 CDD:176263 10/44 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1475
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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