DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CaMKI and Kalrn

DIOPT Version :9

Sequence 1:NP_524622.1 Gene:CaMKI / 43792 FlyBaseID:FBgn0016126 Length:405 Species:Drosophila melanogaster
Sequence 2:XP_038944566.1 Gene:Kalrn / 84009 RGDID:621865 Length:2989 Species:Rattus norvegicus


Alignment Length:308 Identity:92/308 - (29%)
Similarity:144/308 - (46%) Gaps:37/308 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 AKDLKELNKQVSIEEKYNLHGLLGTGAFSEVR----LAESKDSPGEHFAVKIIDKKALKGKEESL 75
            |.|...::.:.:.:..|.....:|.|.||.|:    .|..||     .|||.:.|| :|.||:: 
  Rat  2671 AADGATISWKENFDSAYTELNEIGRGRFSIVKKCIHKATRKD-----VAVKFVSKK-MKKKEQA- 2728

  Fly    76 ENEIRVLRRFSANHFDGKCLNGTRLTHPNIVQLLETYEDKSKVYLVMELVTGGELFDRIVEKGSY 140
            .:|..:|:               .|.||..|.|.:|||..:...|::||:..|.|.|.::.....
  Rat  2729 AHEAALLQ---------------HLQHPQYVTLHDTYESPTSYILILELMDDGRLLDYLMNHDEL 2778

  Fly   141 TEKDASHLIRQILEAVDYMHEQGVVHRDLKPENLLYYSPDDDSKIMISDFGLSKMEDSGIMA--- 202
            .|:..:..||.|:||:.|:|...|.|.|:||||||.     |.:|.:....|..:||:..::   
  Rat  2779 MEEKVAFYIRDIMEALQYLHNCRVAHLDIKPENLLI-----DLRIPVPRVKLIDLEDAVQISGHF 2838

  Fly   203 ---TACGTPGYVAPEVLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGDFEFD 264
               ...|.|.:.||||:...|.....|:|||||::|::|.|..||.||:.......:.:.||.|.
  Rat  2839 HIHHLLGNPEFAAPEVIQGIPVSLGTDIWSIGVLTYVMLSGVSPFLDESKEETCINVCRVDFSFP 2903

  Fly   265 SPYWDEISESAKHFIKNLMCVTVEKRYTCKQALGHAWISGNEASSRNI 312
            ..|:..:|.:|:.||..::.....:|.|....|.|.|:..:..|...|
  Rat  2904 HEYFCGVSNAARDFINVILQEDFRRRPTAATCLQHPWLQPHNGSYSKI 2951

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKINP_524622.1 STKc_CaMKI 27..301 CDD:270985 87/283 (31%)
S_TKc 31..302 CDD:214567 87/280 (31%)
KalrnXP_038944566.1 SEC14 42..180 CDD:214706
SPEC 193..413 CDD:238103
SPEC 314..539 CDD:238103
SPEC 540..769 CDD:238103
SPEC 894..1132 CDD:238103
SPEC 1138..1238 CDD:197544
RhoGEF 1287..1457 CDD:238091
PH1_Kalirin_Trio_like 1464..1586 CDD:270060
SH3_Kalirin_1 1652..1711 CDD:212786
SH3-RhoG_link 1708..1892 CDD:406906
RhoGEF 1935..2104 CDD:395496
PH2_Kalirin_Trio_p63RhoGEF 2109..2243 CDD:270061
SH3_Kalirin_2 2327..2385 CDD:212787
Ig strand A 2466..2469 CDD:409353
I-set 2474..2568 CDD:400151
Ig strand A' 2482..2485 CDD:409353
Ig strand B 2491..2498 CDD:409353
Ig strand C 2504..2512 CDD:409353
Ig strand C' 2515..2517 CDD:409353
Ig strand D 2523..2532 CDD:409353
Ig strand E 2534..2538 CDD:409353
Ig strand F 2547..2555 CDD:409353
Ig strand G 2558..2568 CDD:409353
FN3 2572..2663 CDD:238020
STKc_Kalirin_C 2693..2940 CDD:271017 86/273 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

Return to query results.
Submit another query.