DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaMKI and camk2b

DIOPT Version :9

Sequence 1:NP_524622.1 Gene:CaMKI / 43792 FlyBaseID:FBgn0016126 Length:405 Species:Drosophila melanogaster
Sequence 2:XP_012814756.1 Gene:camk2b / 780379 XenbaseID:XB-GENE-868398 Length:624 Species:Xenopus tropicalis


Alignment Length:383 Identity:145/383 - (37%)
Similarity:209/383 - (54%) Gaps:38/383 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 EKYNLHGLLGTGAFSEVRLAESKDSPGEHFAVKIIDKKALKGKE-ESLENEIRVLRRFSANHFDG 92
            ::|.|:..:|.||||.||.. .|...|..:|.|||:.|.|..:: :.||.|.|:.|         
 Frog    10 DEYQLYEEIGKGAFSVVRRC-VKLCTGHEYAAKIINTKKLSARDHQKLEREARICR--------- 64

  Fly    93 KCLNGTRLTHPNIVQLLETYEDKSKVYLVMELVTGGELFDRIVEKGSYTEKDASHLIRQILEAVD 157
                  .|.|||||:|.::..::...||:.:||||||||:.||.:..|:|.||||.|:||||||.
 Frog    65 ------LLKHPNIVRLHDSISEEGFHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVL 123

  Fly   158 YMHEQGVVHRDLKPENLLYYSPDDDSKIMISDFGLSKMEDSGIMAT---ACGTPGYVAPEVLAQK 219
            :.|:.|||||||||||||..|....:.:.::||||: :|..|....   ..|||||::||||.::
 Frog   124 HCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRKE 187

  Fly   220 PYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGDFEFDSPYWDEISESAKHFIKNLMC 284
            .|||.||:|:.|||.||||.|||||:||:...|:.||..|.::|.||.||.::..||:.|..::.
 Frog   188 AYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLT 252

  Fly   285 VTVEKRYTCKQALGHAWISGNEASSRNIH--GTVSEQLKKNFAKSRWKQAYYAATVIRQMQRMAL 347
            :...||.|..:||.|.|:......:..:|  .|| |.|||..|:.:.|.|.....:         
 Frog   253 INPAKRITAHEALKHPWVCQRSTVASMMHRQETV-ECLKKFNARRKLKGAILTTML--------- 307

  Fly   348 NSNSNANFDSSNSSNQDSTTPTAATGAWTSNVLSSQQSVQSHAQEMNK--SGGSTNAA 403
               :..||.....:...:|..||||......|....:|:.:...::.|  :..:.|:|
 Frog   308 ---ATRNFSVGRQTTAPATITTAATSTALGLVEQGTKSLLNKKTDVGKPQTNSTKNSA 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKINP_524622.1 STKc_CaMKI 27..301 CDD:270985 122/275 (44%)
S_TKc 31..302 CDD:214567 122/274 (45%)
camk2bXP_012814756.1 STKc_CaMKII 10..301 CDD:270988 132/308 (43%)
S_TKc 12..270 CDD:214567 122/274 (45%)
CaMKII_AD 492..619 CDD:285524
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X46
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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