DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaMKI and trioa

DIOPT Version :9

Sequence 1:NP_524622.1 Gene:CaMKI / 43792 FlyBaseID:FBgn0016126 Length:405 Species:Drosophila melanogaster
Sequence 2:XP_021323750.1 Gene:trioa / 557667 ZFINID:ZDB-GENE-060503-334 Length:3115 Species:Danio rerio


Alignment Length:313 Identity:96/313 - (30%)
Similarity:154/313 - (49%) Gaps:29/313 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LFGKKDSGKKAKAKDLKELNKQVSIEEKYNLHGLLGTGAFSEVRLAESKDSPGEHFAVKIIDKKA 67
            :.|....|.:...||        :.|..|.....||.|.||.|:..:.:.|. ...|||.::||.
Zfish  2793 VLGTTSDGIRVMWKD--------NFESFYTEVAELGRGRFSVVKRCDQRGSK-RTVAVKFVNKKL 2848

  Fly    68 LKGKEESLENEIRVLRRFSANHFDGKCLNGTRLTHPNIVQLLETYEDKSKVYLVMELVTGGELFD 132
            :  |.:.:.:|..||:               ||.||::|:||:|:|..|...||:|:...|.|.|
Zfish  2849 M--KRDQVTHEFSVLQ---------------RLQHPHLVRLLDTFETSSSYALVLEMSDQGRLLD 2896

  Fly   133 RIVEKGSYTEKDASHLIRQILEAVDYMHEQGVVHRDLKPENLLYYSPDDDSKIMISDFG-LSKME 196
            .||..|:.||:..:..:|.||||:.|:|...:||.|||||||:.........:.::||| ..::.
Zfish  2897 YIVSWGNLTEEKVAFYLRDILEALQYLHNCRIVHLDLKPENLVVEQSPSQPLVKLTDFGDAVQLN 2961

  Fly   197 DSGIMATACGTPGYVAPEVLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGDF 261
            .:..:....|:|.:.|||::...|...:.|:||:||::|::|.|..||.||:.......|.:.||
Zfish  2962 STPYVHPLLGSPEFAAPELVLGDPVSLSSDLWSLGVLTYVMLSGASPFLDESVEETCLNICRLDF 3026

  Fly   262 EFDSPYWDEISESAKHFIKNLMCVTVEKRYTCKQALGHAWI--SGNEASSRNI 312
            .|...|:..:|::|:.|:..|:.:...||......|...|:  .|...|:..|
Zfish  3027 SFPDDYFQGVSQAARDFMCLLLRMEPSKRPPATSCLQEPWLRAGGGRRSAECI 3079

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKINP_524622.1 STKc_CaMKI 27..301 CDD:270985 88/274 (32%)
S_TKc 31..302 CDD:214567 87/271 (32%)
trioaXP_021323750.1 SEC14 61..199 CDD:214706
SPEC 212..447 CDD:238103
SPEC 343..589 CDD:238103
SPEC 590..806 CDD:238103
SPEC 810..1037 CDD:238103
SPEC 931..1160 CDD:238103
SPEC 1166..1266 CDD:197544
RhoGEF 1316..1488 CDD:238091
PH1_Kalirin_Trio_like 1495..1627 CDD:270060
SH3_Kalirin_1 1695..1754 CDD:212786
SH3-RhoG_link 1752..2000 CDD:318750
RhoGEF 2007..2180 CDD:238091
PH2_Kalirin_Trio_p63RhoGEF 2185..2324 CDD:270061
Atrophin-1 <2364..2523 CDD:331285
SH3_Kalirin_2 2570..2628 CDD:212787
I-set 2702..2793 CDD:254352 96/313 (31%)
PKc_like 2805..3067 CDD:328722 90/287 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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