DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaMKI and Trio

DIOPT Version :9

Sequence 1:NP_524622.1 Gene:CaMKI / 43792 FlyBaseID:FBgn0016126 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_001074771.1 Gene:Trio / 223435 MGIID:1927230 Length:3103 Species:Mus musculus


Alignment Length:353 Identity:102/353 - (28%)
Similarity:160/353 - (45%) Gaps:54/353 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DSGKKAKAKDLKEL---NKQVSIEEKYNLHGL------LGTGAFSEVRLAESKDSPGEHFAVKII 63
            |.|..:.:..|:.|   :..:.:..|.|....      ||.|.|:.|:..:.|.:. ...|.|.:
Mouse  2768 DMGSASSSASLRVLGPGSDGIVVTWKDNFDAFYSEVAELGRGRFAVVKKCDQKGTK-RAVATKFV 2831

  Fly    64 DKKALKGKEESLENEIRVLRRFSANHFDGKCLNGTRLTHPNIVQLLETYEDKSKVYLVMELVTGG 128
            :||.:  |.:.:.:|:.:|:               .|.||.:|.||:|:|..:...||:|:...|
Mouse  2832 NKKLM--KRDQVTHELGILQ---------------NLQHPLLVSLLDTFETPTSYVLVLEMADQG 2879

  Fly   129 ELFDRIVEKGSYTE-KDASHLIRQILEAVDYMHEQGVVHRDLKPENLLYYSPDDDSKIMISDFG- 191
            .|.|.:|..||.|| |..:|| .::||||.|:|...:.|.||||||:|.........|.::||| 
Mouse  2880 RLLDCVVRWGSLTEGKVRAHL-GEVLEAVRYLHNCRIAHLDLKPENILVDQSLAKPTIKLADFGD 2943

  Fly   192 LSKMEDSGIMATACGTPGYVAPEVLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQI 256
            ..::..:..:....|.|.:.|||::...|.....|.||:||::|:||.|..||.|::.......|
Mouse  2944 AVQLNTTYYIHQLLGNPEFAAPEIILGNPVSLTADTWSVGVLTYVLLSGVSPFLDDSVEETCLNI 3008

  Fly   257 LKGDFEFDSPYWDEISESAKHFIKNLMCVTVEKRYTCKQALGHAWISGNEASSRNIHGT------ 315
            .:.||.|...|:..:|:.||.|:..|:.....||.:...||...|:.....|.:   ||      
Mouse  3009 CRLDFSFPEDYFQGVSQKAKEFVCFLLQEDPAKRPSAALALQEQWLQAGNGSGK---GTGVLDTS 3070

  Fly   316 ----VSEQLK-----------KNFAKSR 328
                ..|:.|           |||.:||
Mouse  3071 RLTSFIERRKHQNDVRPIRSIKNFLQSR 3098

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKINP_524622.1 STKc_CaMKI 27..301 CDD:270985 87/281 (31%)
S_TKc 31..302 CDD:214567 86/278 (31%)
TrioNP_001074771.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27
SEC14 69..204 CDD:214706
Spectrin 1 218..338
SPEC 220..445 CDD:238103
Spectrin 2 340..446
SPEC 341..566 CDD:238103
Spectrin 3 566..672
SPEC 567..783 CDD:238103
Spectrin 4 673..784
SPEC 787..1014 CDD:238103
Spectrin 5 907..1012
SPEC 908..1137 CDD:238103
Spectrin 6 1138..1244
SPEC 1143..1243 CDD:197544
RhoGEF 1295..1465 CDD:238091
PH1_Kalirin_Trio_like 1472..1594 CDD:270060
PH 1505..1590 CDD:278594
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1601..1651
SH3_Kalirin_1 1659..1718 CDD:212786
SH3-RhoG_link 1715..1972 CDD:293215
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1781..1906
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1927..1957
RhoGEF 1970..2143 CDD:238091
PH2_Kalirin_Trio_p63RhoGEF 2148..2286 CDD:270061
PH 2175..2271 CDD:278594
SH3_Kalirin_2 2559..2617 CDD:212787
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2643..2666
I-set 2689..2780 CDD:254352 3/11 (27%)
Ig 2703..2780 CDD:299845 3/11 (27%)
STKc_Trio_C 2792..3054 CDD:271015 87/280 (31%)
S_TKc 2800..3054 CDD:214567 85/272 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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