DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaMKI and dcx

DIOPT Version :9

Sequence 1:NP_524622.1 Gene:CaMKI / 43792 FlyBaseID:FBgn0016126 Length:405 Species:Drosophila melanogaster
Sequence 2:XP_004916902.1 Gene:dcx / 100493401 XenbaseID:XB-GENE-992092 Length:360 Species:Xenopus tropicalis


Alignment Length:369 Identity:68/369 - (18%)
Similarity:122/369 - (33%) Gaps:118/369 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 HFD----------GKCLNG----TRLTHPNI--VQLLETYEDKSKVYLVMELVTGGELFDRI--- 134
            |||          ...:||    |...|.:.  .:.|:...::.|...|.....|...|..|   
 Frog     7 HFDERDKTSRNARASRMNGLPSPTHSAHCSFYRTRTLQALSNEKKAKKVRFYRNGDRYFKGIVYA 71

  Fly   135 VEKGSYTEKDA--SHLIRQILEAVDYMHEQGVVHRDLKPENLLYYSPDDDSKIMISDFGLSKMED 197
            |....:...||  :.|.|.:.:.::.  .|||         ...|:.|..:||.    .:.::|:
 Frog    72 VSSDRFRSFDALLADLTRSLSDNINL--PQGV---------RFIYTIDGMNKIA----NMDELEE 121

  Fly   198 SGIMATACGTPGYVAPEVLAQKPYGKAVDV-WSIGV----------------------------- 232
            .  .:..|.:..:     ..:..|.|.|:. ||:.|                             
 Frog   122 G--ESYVCSSDNF-----FKKLEYTKNVNPNWSVNVKTSASKKSPQSLGSCNNAQSKENKDFVRP 179

  Fly   233 -ISYILLCGYPP------FYDENDANLFAQILKGDFEFDSPYWDEISESAKHFIKNLMCVTVEKR 290
             :..|:..|..|      ..::..|:.|.|:|           .:|:|:.|     |....|:|.
 Frog   180 KLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVL-----------TDITEAIK-----LETGVVKKL 228

  Fly   291 YTCKQALGHAWISGNEASSRNIHGTVSEQ--------LKKNFAKSRWKQAYYAATVIRQMQRMAL 347
            ||         :.|.:.:.  :|....|.        .|..:|:..:........|::.......
 Frog   229 YT---------LDGKQVTC--LHDFFGEDDVFIACGPEKFRYAQDDFSLDENECRVMKGTPAQTP 282

  Fly   348 NSNSNANFDSSNSS---NQDSTTPTAATGAWTSNVLSSQQSVQS 388
            .|:|:||..|:..|   ::.|.:|..:....:|:.||:.:|.||
 Frog   283 KSSSSANLKSAAKSPAPSRRSKSPADSANGTSSSQLSTPKSKQS 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKINP_524622.1 STKc_CaMKI 27..301 CDD:270985 48/269 (18%)
S_TKc 31..302 CDD:214567 48/270 (18%)
dcxXP_004916902.1 DCX1_DCX 51..139 CDD:340529 19/109 (17%)
DCX2 176..259 CDD:340589 19/109 (17%)
Spc7_N <278..>335 CDD:373822 14/49 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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