DRSC/TRiP Functional Genomics Resources

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Protein Alignment lgs and pygo

DIOPT Version :9

Sequence 1:NP_651922.1 Gene:lgs / 43791 FlyBaseID:FBgn0039907 Length:1469 Species:Drosophila melanogaster
Sequence 2:NP_651872.1 Gene:pygo / 43718 FlyBaseID:FBgn0043900 Length:815 Species:Drosophila melanogaster


Alignment Length:930 Identity:205/930 - (22%)
Similarity:271/930 - (29%) Gaps:348/930 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   612 PGDVISDMGAVIGCNNNQKTSVQCGSGVGVVTGTTAAGVNVNMHCSSSGAPNGNMMGSSTDML-- 674
            |.|:||   |.......:|||....|...|.....||....:|  ....||     .:..|:|  
  Fly    29 PTDIIS---APSNPKKRRKTSSAANSAAAVAAAAAAAAAANSM--QQQQAP-----PTPQDLLPP 83

  Fly   675 ---ASFGNTSCNVIGTAP-DMSKEVLNQDSRTHSHQGGVAQMEWSKIQHQFFEERLKGGKPRQVT 735
               ..||:|   :|.:.| |.|.:|....|...:....:.||........|     .||.|..  
  Fly    84 PPMGGFGDT---IIASNPFDDSPQVSAMSSSAAAAMAAMNQMGGGPGGGHF-----GGGGPGG-- 138

  Fly   736 GTVVPQQQTPSGSGGNSLNNQVRPLQGPPPP------------------YHSIQRSASVPIATQS 782
               .|..:...|.||           |||||                  .|........|...:.
  Fly   139 ---HPHWEDRMGMGG-----------GPPPPPHMHPHMHPHHPGGPMGHPHGPHPHMGGPPPMRG 189

  Fly   783 PNPSSPNNLSLPSPRTTAAVMGLPTNSPSMD-----GTGSLSGSVPQANTSTVQAGTTTVLSANK 842
            .:|..|:.:. |.|.     :|||   |.|:     |.|...|.||..:.....||...:     
  Fly   190 MSPMHPHQMG-PGPG-----VGLP---PHMNHGRPGGPGGPGGPVPMGSPMGGIAGMGGM----- 240

  Fly   843 NCFQADTPSPSNQNRSRNTGSSSVLTHNLSSNPSTPLSHLSPKEFESFGQSSAGDNMKSRRPSPQ 907
                    ||..     ..|..|:..|::.      :..|||     .|....|.|.::.:.||.
  Fly   241 --------SPMG-----GMGGPSISPHHMG------MGGLSP-----MGGGPNGPNPRAMQGSPM 281

  Fly   908 ---GQRSPVNSLIEANKDVRFAASSPGFNPHPHMQSNSNSALNAYKMGSTNIQMERQASAQGGSV 969
               ||.||:|||         ...||..||                :||                
  Fly   282 GGPGQNSPMNSL---------PMGSPMGNP----------------IGS---------------- 305

  Fly   970 QFSRRSDNIPLNPNSGNRP--------PPNKMTQNFDPISSLAQMSQQLTSCVSSMGSPAGTG-- 1024
                     ||.|.||..|        |..:..|...|..:..||..      ..:.||.|.|  
  Fly   306 ---------PLGPPSGPGPGNPGNTGGPQQQQQQPPQPPMNNGQMGP------PPLHSPLGNGPT 355

  Fly  1025 --GMTMMG----GPGPSDINIEHGIISGLDG-SGIDTINQNNCHSMNVVMNSMGPRMLNPKMCVA 1082
              |..|.|    ||||..        .||.| .||...:.||                     ..
  Fly   356 GHGSHMPGGPIPGPGPGP--------GGLVGPGGISPAHGNN---------------------PG 391

  Fly  1083 GGPNGPPGFNPNSPNGGLRENSIGSGCGSANSSNFQGVVPPGARMMGRMPVNFGSNFNPNIQVKA 1147
            |..|...|.||    ||...|:.||...:|:::|....:.|.|..:| :|.:..|| .|::...|
  Fly   392 GSGNNMLGGNP----GGGNSNNNGSNTSNASNNNQNPHLSPAAGRLG-VPTSMQSN-GPSVSSVA 450

  Fly  1148 S----TPNTIQYMPVRAQNANNNNNNGANNVRMPPSL--EFLQRYANPQMGAVGNG-SPICPPSA 1205
            |    :|.|....|  ...|.:.:.:...:...||::  ......|.|..|...:| ||:..|:.
  Fly   451 SSSVPSPATPTLTP--TSTATSMSTSVPTSSPAPPAMSPHHSLNSAGPSPGMPNSGPSPLQSPAG 513

  Fly  1206 SDG-TPGMPGLMAGPGAGGMLMNSSGEQHQNKI-----TNNPGASNGINFFQNCNQMSIVDEEGG 1264
            .:| .........||..|.|:.|:...|||..:     .:.||...|:..    |||....:...
  Fly   514 PNGPNNNNSNNNNGPMMGQMIPNAVPMQHQQHMGGGPPGHGPGPMPGMGM----NQMLPPQQPSH 574

  Fly  1265 L-PGHDGSMNI---------GQPSMIRGMRPHAM-RPNVMG--ARMPPVNRQIQFAQSSDGIDCV 1316
            | |.|...||.         |.|       ||.| .|.:.|  |.|||              ...
  Fly   575 LGPPHPNMMNHPHHPHHHPGGPP-------PHMMGGPGMHGGPAGMPP--------------HMG 618

  Fly  1317 GDPSSFFTNASCNSAGPHMFGSAQQANQPKTQHIKNIPSGMCQNQSGLAVAQGQIQLHGQGHAQG 1381
            |.|:.........:|||||                                       |.||..|
  Fly   619 GGPNPHMMGGPHGNAGPHM---------------------------------------GHGHMGG 644

  Fly  1382 QSLIGPTNNNLMSTAGSVSATNGVSGINFVGPSSTDLKYAQQYHSFQQQLYATNTRSQQQQHMHQ 1446
            ....||                |..|:|  ||....:                     ...|.|.
  Fly   645 VPGPGP----------------GPGGMN--GPPHPHM---------------------SPHHGHP 670

  Fly  1447 QHQSNMITMPPNLSPNPTFF 1466
            .|..|     |...|.|..|
  Fly   671 HHHHN-----PMGGPGPNMF 685

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lgsNP_651922.1 BCL9 521..559 CDD:288370
pygoNP_651872.1 PHD_dPYGO 749..802 CDD:277107
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23194
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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