DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dati and let-391

DIOPT Version :9

Sequence 1:NP_001245421.1 Gene:dati / 43789 FlyBaseID:FBgn0262636 Length:1150 Species:Drosophila melanogaster
Sequence 2:NP_491744.3 Gene:let-391 / 182953 WormBaseID:WBGene00006492 Length:453 Species:Caenorhabditis elegans


Alignment Length:405 Identity:78/405 - (19%)
Similarity:136/405 - (33%) Gaps:131/405 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   360 NNDKMANEIQLQLSRSSSAAAISERTLEECWSTLQRLFMHKSAMQQIQQQIPRVGLGTHGVTGSA 424
            ||:.:          ..::.||.|....||....|:  .|:..     ::|.::...|:    ..
 Worm     3 NNEDL----------DENSDAIFEEWAAECTPDAQK--EHEEL-----EEIVKIPDSTY----RK 46

  Fly   425 NLGGSITPSSDTKPHQCQQCMKSFSSNHQLVQHIRVHTGEKPYKCSYCDRRFKQLSHVQQHTRL- 488
            ..|....|:..|    |:.|..:.....::::|:|.|||||||:|..|..||.|.:.:..|.|: 
 Worm    47 KKGNQKLPTVTT----CEVCGVALKYPSRIMEHMRTHTGEKPYECDICGMRFTQRTPMINHFRVQ 107

  Fly   489 HTGERPYKCHLPDCGRAFIQLSNLQQHLRNHDAQVERAKNRPFHCNICGKGFATESSLRTHTSKE 553
            |.|:.|:.|:. .||:.|:..|....|..:|:........||:                      
 Worm   108 HMGDLPFLCNF-GCGKRFVNNSRRTAHELSHNGLKRAGPARPY---------------------- 149

  Fly   554 LQLHLGVLQQHAALIGGPNATSCPVCHKLFLGTEALVDHMKHVHKEKSPP---------PGGSAS 609
                   |:....::       ||......|...||.:::       |||         |..|:|
 Worm   150 -------LKPVKKIV-------CPSMDMDILSNSALANYI-------SPPTIDSIFQSDPSTSSS 193

  Fly   610 --SQFSELNQIVTGNGNGTGSSNEQIATQCTTESNSHQATVGSSLID------------------ 654
              |||...||          ::.:.|   ..:|....:|.:.::.||                  
 Worm   194 SPSQFQSSNQ----------TTKQSI---YPSEKEMEKAAISNARIDDVINTVLARVLAPIDEEI 245

  Fly   655 ------------SFLGKRRTANHPCPVCGKHYVNEGSLRKHLACHAENSQLTNSLRMWPCSVCQA 707
                        :::..||.....|.:||....:...:..|:..|...       :.:.|..|..
 Worm   246 PIEEPEKAPQKRAYISNRRATLAQCNICGLMLKHPSKIADHIRTHTGE-------KPFECGECGL 303

  Fly   708 VFTHENGLLTHMESM 722
            ..:..:.|..|:..|
 Worm   304 SLSKASSLKVHIRRM 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
datiNP_001245421.1 COG5048 <429..>511 CDD:227381 27/82 (33%)
C2H2 Zn finger 441..461 CDD:275368 4/19 (21%)
zf-H2C2_2 454..478 CDD:290200 13/23 (57%)
C2H2 Zn finger 469..489 CDD:275368 7/20 (35%)
zf-H2C2_2 481..508 CDD:290200 9/27 (33%)
C2H2 Zn finger 497..519 CDD:275368 6/21 (29%)
C2H2 Zn finger 533..557 CDD:275368 0/23 (0%)
C2H2 Zn finger 576..594 CDD:275368 5/17 (29%)
C2H2 Zn finger 667..687 CDD:275370 4/19 (21%)
C2H2 Zn finger 702..719 CDD:275370 3/16 (19%)
let-391NP_491744.3 C2H2 Zn finger 59..79 CDD:275368 4/19 (21%)
zf-H2C2_2 73..96 CDD:290200 13/22 (59%)
C2H2 Zn finger 87..108 CDD:275368 7/20 (35%)
C2H2 Zn finger 116..137 CDD:275368 6/21 (29%)
C2H2 Zn finger 270..290 CDD:275368 4/19 (21%)
zf-H2C2_2 286..304 CDD:290200 4/24 (17%)
C2H2 Zn finger 298..319 CDD:275368 5/21 (24%)
C2H2 Zn finger 327..347 CDD:275368
C2H2 Zn finger 357..377 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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