DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hcf and KEL3

DIOPT Version :9

Sequence 1:NP_524621.2 Gene:Hcf / 43788 FlyBaseID:FBgn0039904 Length:1500 Species:Drosophila melanogaster
Sequence 2:NP_015060.1 Gene:KEL3 / 855865 SGDID:S000006184 Length:651 Species:Saccharomyces cerevisiae


Alignment Length:448 Identity:89/448 - (19%)
Similarity:160/448 - (35%) Gaps:131/448 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GSDFVDPAFSSGERISASDLNSEHIIQAENHSFANRISMDMDVPDG------------------- 48
            |.:|.||     |.......|..:....:|:|:...:|.:..:|..                   
Yeast    99 GGEFTDP-----ETKLTHFYNDLYSYSIKNNSWKKYVSQNAPLPRSSAAVAVHPSGIALLHGGEF 158

  Fly    49 ---------HQLDSNLTGFRW----------KRVLNPTGPQPRPRHGHRAINIKELMVVFGG--- 91
                     |..|:      |          |.........|..|.|||.|..|...::|||   
Yeast   159 SSPKQSKFYHYSDT------WLFDCVERKFTKLEFGGRDSSPSARSGHRIIAWKNYFILFGGFRD 217

  Fly    92 ---GNEGIVDELHVYNTVTNQWYVPVLKGDVPNGCAAYGFVVEGTRMFVFGGMIEY--------- 144
               |....:::|..::..|.:| ..:.....|:..:.:.|:.......:.||..:.         
Yeast   218 LGNGQTSYLNDLWCFDISTYKW-TKLETNSKPDARSGHCFIPTDNSAILMGGYCKIIAKNNKNLM 281

  Fly   145 -GKYSNELYELQAT----KWEWRKMYPESPDSGLSPCPRLGHSFTMVGE-KIFLFGGLANESDDP 203
             ||..|:.::|..|    ||:|.|:    .:....|.||:|:||.:..: |...|||:.:..:..
Yeast   282 KGKILNDAWKLNLTPDPKKWQWEKL----KNFKNQPSPRVGYSFNLWKQNKSVAFGGVYDLQETE 342

  Fly   204 KNNIPKYLNDLYILDTRGVHSHNGKWIVPKTYGDSPPPRESHTGISFAT---KSNGN----LNLL 261
            ::....:.||||:.     |....||...:.    .|.|::::..|.||   |||.:    |..|
Yeast   343 ESLESVFYNDLYMF-----HLELNKWSKLRI----KPQRQTNSKNSPATSKRKSNKDQEKELQDL 398

  Fly   262 IYGGMSGCRLGDLWLLETDSMTWSKPKT---------------------SGEAPLPRSLHSSTMI 305
            :...::...|.|......|:.| :.|.:                     |.:.|.||...::.::
Yeast   399 LNSILAKSNLNDDDDDNDDNST-TGPNSIDDDEDNEDDSDLDNQEDITISNQLPHPRFNAATCVV 462

  Fly   306 GNKMYVFGG-WVPLVINDSKSTTEREWKCTNTLAVLDLETMT-----WENVTLDTVEE 357
            |:.::::.| |         ...|:::. .|:...:||..:.     ||:  |..:||
Yeast   463 GDSLFIYSGVW---------ELGEKDYP-INSFYSIDLNKLDGVKVYWED--LSAIEE 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HcfNP_524621.2 Kelch_1 73..110 CDD:279660 12/42 (29%)
KELCH repeat 74..115 CDD:276965 13/46 (28%)
KELCH repeat 123..175 CDD:276965 12/65 (18%)
Kelch_3 132..184 CDD:290151 16/65 (25%)
Kelch_5 175..221 CDD:290565 14/46 (30%)
KELCH repeat 178..239 CDD:276965 15/61 (25%)
Kelch_3 260..305 CDD:290151 10/65 (15%)
KELCH repeat 297..360 CDD:276965 13/67 (19%)
Kelch_3 306..371 CDD:290151 12/58 (21%)
FN3 <1307..1338 CDD:238020
FN3 1344..1448 CDD:238020
KEL3NP_015060.1 Kelch_3 92..146 CDD:404319 10/51 (20%)
PLN02153 94..>316 CDD:177814 42/232 (18%)
KELCH repeat 138..194 CDD:276965 4/61 (7%)
KELCH repeat 197..242 CDD:276965 13/45 (29%)
Kelch_3 206..255 CDD:404319 9/49 (18%)
KELCH repeat 251..308 CDD:276965 12/60 (20%)
Kelch_4 315..371 CDD:404322 16/64 (25%)
Kelch_2 453..506 CDD:400133 12/64 (19%)
DUF4110 564..651 CDD:404326
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1494
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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