DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hcf and AT1G74150

DIOPT Version :10

Sequence 1:NP_524621.2 Gene:Hcf / 43788 FlyBaseID:FBgn0039904 Length:1500 Species:Drosophila melanogaster
Sequence 2:NP_177555.3 Gene:AT1G74150 / 843755 AraportID:AT1G74150 Length:569 Species:Arabidopsis thaliana


Alignment Length:691 Identity:159/691 - (23%)
Similarity:252/691 - (36%) Gaps:198/691 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 RWKRV-------LNPTGPQPRPRHGHRAINIKELMVVFGG-GNEG-IVDELHVYNTVTNQWYVPV 114
            ||:||       .:..||..|..|...||.....:.|||| |.:. :.:::||::..|..|..|.
plant     2 RWERVQQVGLGDSSSFGPGKRWGHTCNAIKGGRFLYVFGGFGRDNCLTNQVHVFDAETQIWIRPE 66

  Fly   115 LKGDVPNGCAAYGFVVEGTRMFVFGGMIEYGKYSNELYELQATKWEWRKMYPESPD-SGLSPCPR 178
            :.|..|....::.....|..:||||| .:..||.|:::.|......|.:     || .|..|..|
plant    67 INGVPPCPRDSHSCTTVGDNLFVFGG-TDGTKYLNDVHILDTYSHTWIR-----PDIRGEGPRVR 125

  Fly   179 LGHSFTMVGEKIFLFGGLANESDDPKNNIPKYLNDLYILDTRGVHSHNGKWIVPKTYGDSPPPRE 243
            ..||..:|.:::|:|||....||   ::...:.||||||:|     ....|....|.|..|..|:
plant   126 EAHSAALVDKRLFIFGGCGKSSD---SDDEVFYNDLYILNT-----ETYMWKRAVTSGKPPSARD 182

  Fly   244 SHTGISFATKSNGNLNLLIYGG--MSGCRLGDLWLLETDSMTWSKPKTSGEAPLPRSLHSSTMIG 306
            |||..::..|      :::.||  :....|.|:.:|:||...|.:.||||:...||:.|.:..:.
plant   183 SHTCSAWKNK------IIVVGGEDLDDYYLSDVHILDTDKFVWKELKTSGQVLTPRAGHVTVALE 241

  Fly   307 NKMYVFGGWVPLVINDSKSTTEREWKCTNTLAVLDLETMTWENVTLDTVEENVPRARAGHCAVGI 371
            ..::||||:     .||::..:       .|.||||||..|..| :..||.  |.||....||.:
plant   242 RNLFVFGGF-----TDSQNLYD-------DLYVLDLETGVWSKV-VAMVEG--PSARFSSAAVCL 291

  Fly   372 QS---------------------------------RLYVWSGRDGYRKAWNNQVCCK-------- 395
            ..                                 |.:...||...||  ..::.|:        
plant   292 DPYKAGSFFFVGGCNKNLEPLDDIYYLHTEGRYDVRFHQNPGRSSLRK--QMKLKCQGQELTVAK 354

  Fly   396 ------------DLWYLEVSKPLYAVKVALVRASTHALELSWTATTFAAAYVLQIQKIEQPLNTS 448
                        ::.|::..||::..:|      |....|.:|..|.....||:           
plant   355 TNIDHGRENVPLNIGYIDQRKPMFQARV------TENAPLGYTIETIIDGKVLR----------- 402

  Fly   449 SKLLSNNIVQQGTPTSAETSGINISANRSGSALGLGVEATSTVLKLEKESLQLSGCQPETNVQPS 513
            ..|.||.      .:|...:..:||:.                 ::|:.:.....|.....:..:
plant   403 GVLFSNR------HSSVRIADSSISSR-----------------QVERPATSDGDCDHRAKIPRT 444

  Fly   514 VNDLLQSMSQ---PSSPASRADKDPLSSGGGTTFNLSTSVASVHPQISVISSTAAVT----GNDT 571
            .:......||   |:.|:...:|....|....|..:.|..|:|:.:.:..:.|||||    ..|.
plant   445 FSKDPAGSSQQAGPTDPSDDTNKKVADSNDTDTPMIDTVDANVNMEGTHEAETAAVTIDAKDQDA 509

  Fly   572 AS-PSGAINSILQKFRPVVTAVRTSTTTAVSIATSTSDPLSVRVPSTMSANVVLSSSSSTLRIVP 635
            :. ..|.:|                           :|||.|   |....||:   |:...:..|
plant   510 SQLDKGIVN---------------------------TDPLPV---SHDQVNVI---STDAAKADP 541

  Fly   636 SVTASHSLRIASSQASGNNCRSSSAINILKTALPNVAVQSQ 676
            .|.:|     ...|..|.:....:          ||..|.|
plant   542 GVDSS-----TRKQEEGTSAEEDA----------NVGPQPQ 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HcfNP_524621.2 PLN02193 <59..363 CDD:177844 96/315 (30%)
KELCH repeat 74..115 CDD:276965 13/42 (31%)
KELCH repeat 123..175 CDD:276965 14/52 (27%)
KELCH repeat 178..239 CDD:276965 20/60 (33%)
KELCH repeat 297..360 CDD:276965 19/62 (31%)
FN3 <1307..>1381 CDD:442628
FN3 <1307..1338 CDD:238020
FN3 1344..1448 CDD:238020
AT1G74150NP_177555.3 NanM 19..308 CDD:442289 95/323 (29%)
KELCH repeat 22..72 CDD:276965 15/49 (31%)
KELCH repeat 75..122 CDD:276965 14/52 (27%)
KELCH repeat 125..170 CDD:276965 18/52 (35%)
KELCH repeat 181..227 CDD:276965 16/51 (31%)
KELCH repeat 232..276 CDD:276965 17/56 (30%)
Blue background indicates that the domain is not in the aligned region.

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