DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hcf and FKF1

DIOPT Version :10

Sequence 1:NP_524621.2 Gene:Hcf / 43788 FlyBaseID:FBgn0039904 Length:1500 Species:Drosophila melanogaster
Sequence 2:NP_564919.1 Gene:FKF1 / 843133 AraportID:AT1G68050 Length:619 Species:Arabidopsis thaliana


Alignment Length:345 Identity:80/345 - (23%)
Similarity:138/345 - (40%) Gaps:92/345 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 GERISASDLNSEHIIQAENHSFANRISMDMDVPDGHQLDSNLTGFRWKRVLNPTGPQPRPRHGHR 78
            ||.::...|:...:           :::|.:.|:            |:||...:.|..|..|...
plant   322 GEGVNMQPLDDTFV-----------LNLDAECPE------------WQRVRVTSSPPGRWGHTLS 363

  Fly    79 AINIKELMVVFGG-GNEGIVDELHVYNTVTNQ--WY-----VPVLKGDVPNGCAAYGFVVEGTRM 135
            .:| ...:||||| |.:|:::::.|.:.....  |.     .|.|.....:.|     .:||:::
plant   364 CLN-GSWLVVFGGCGRQGLLNDVFVLDLDAKHPTWKEVAGGTPPLPRSWHSSC-----TIEGSKL 422

  Fly   136 FVFGGMIEYGKYSNE--LYELQATKWEWRKMYPESPDSGLSPCPRLGHSFTMVGE-KIFLFGGLA 197
            .|.||..:.|...::  |.:|...|..|:    |.|.| .:|..|||||.::.|. ||.:|||||
plant   423 VVSGGCTDAGVLLSDTFLLDLTTDKPTWK----EIPTS-WAPPSRLGHSLSVFGRTKILMFGGLA 482

  Fly   198 NESDDPKNNIPKYLNDLYILDTRGVHSHNGKW-----------IVPKTYGDSPPPRESHTGISFA 251
            |     ..::.....:.|.:|   :.....:|           :|       ||||..|..:|..
plant   483 N-----SGHLKLRSGEAYTID---LEDEEPRWRELECSAFPGVVV-------PPPRLDHVAVSMP 532

  Fly   252 TKSNGNLNLLIYGG-MSGCRL-GDLWLLE--TDSMTWSKPKTSGEAPLPRSLHSSTMI-GNKMYV 311
            ..     .::|:|| ::|... ..|:|::  .:..:|......|:.|.....||:.:: |.::.|
plant   533 CG-----RVIIFGGSIAGLHSPSQLFLIDPAEEKPSWRILNVPGKPPKLAWGHSTCVVGGTRVLV 592

  Fly   312 FGGWVPLVINDSKSTTEREW 331
            .||           .|..||
plant   593 LGG-----------HTGEEW 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HcfNP_524621.2 PLN02193 <59..363 CDD:177844 75/300 (25%)
KELCH repeat 74..115 CDD:276965 12/48 (25%)
KELCH repeat 123..175 CDD:276965 14/53 (26%)
KELCH repeat 178..239 CDD:276965 18/72 (25%)
KELCH repeat 297..360 CDD:276965 9/36 (25%)
FN3 <1307..>1381 CDD:442628
FN3 <1307..1338 CDD:238020
FN3 1344..1448 CDD:238020
FKF1NP_564919.1 PRK13558 <53..>163 CDD:237426
F-box_AtADO-like 210..256 CDD:438925
NanM 305..597 CDD:442289 77/339 (23%)
KELCH repeat 305..353 CDD:276965 8/53 (15%)
KELCH repeat 357..406 CDD:276965 12/49 (24%)
KELCH repeat 409..454 CDD:276965 12/53 (23%)
KELCH repeat 462..532 CDD:276965 24/84 (29%)
Blue background indicates that the domain is not in the aligned region.

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