DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hcf and ESP

DIOPT Version :10

Sequence 1:NP_524621.2 Gene:Hcf / 43788 FlyBaseID:FBgn0039904 Length:1500 Species:Drosophila melanogaster
Sequence 2:NP_175806.3 Gene:ESP / 841842 AraportID:AT1G54040 Length:341 Species:Arabidopsis thaliana


Alignment Length:330 Identity:85/330 - (25%)
Similarity:131/330 - (39%) Gaps:52/330 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 RWKRV--LNPTGPQPRPRHGHRAINIKELMVVFGG---GNEGIVDELHVYNTVTNQWYVPVLKGD 118
            :|.:|  ...|||.||..||..|:..|  :..|||   .|:.|..:|:|::..|..|.:...|||
plant     8 QWIKVGQKGGTGPGPRSSHGIAAVGDK--LYSFGGELTPNKHIDKDLYVFDFNTQTWSIAQPKGD 70

  Fly   119 VPN-GCAAYGFVVEGTRMFVFGGMIEYGKYSN-ELYELQATKWEWRKMYPE--SPDSGLSPCPRL 179
            .|. .|.....|..||::::|||..|...:.| ..|:...::|.:.....|  .|::      |.
plant    71 APTVSCLGVRMVAVGTKIYIFGGRDENRNFENFRSYDTVTSEWTFLTKLDEVGGPEA------RT 129

  Fly   180 GHSFTMVGEKIFLFGGLANESDDPKNNIPKYLNDLYILDTRGVHSHN---GKWIVPKTYGDSPPP 241
            .||.......:::|||:   |.....|.|...        |.:.::|   |||......||:   
plant   130 FHSMASDENHVYVFGGV---SKGGTMNTPTRF--------RTIEAYNIADGKWAQLPDPGDN--- 180

  Fly   242 RESHTGISFATKSN------GNLNLLIYGGMSGCRLGDLWLLETDSMTWSKPKTSGEAPLPRSLH 300
            .|...|..||....      |....::.||........:...:..|..|::.:|:|..|..||:.
plant   181 FEKRGGAGFAVVQGKIWVVYGFATSIVPGGKDDYESNAVQFYDPASKKWTEVETTGAKPSARSVF 245

  Fly   301 SSTMIGNKMYVFGG--WVPLVINDSKSTTEREWKCTNTLAVLDLETMTWENVTLDTVEENVPRAR 363
            :..::|..:.:|.|  |..|..:....|...|.      ..||.||:.||.:.    ||..|...
plant   246 AHAVVGKYIIIFAGEVWPDLNGHYGPGTLSNEG------YALDTETLVWEKLG----EEGAPAIP 300

  Fly   364 AGHCA 368
            .|..|
plant   301 RGWTA 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HcfNP_524621.2 PLN02193 <59..363 CDD:177844 83/323 (26%)
KELCH repeat 74..115 CDD:276965 13/43 (30%)
KELCH repeat 123..175 CDD:276965 13/54 (24%)
KELCH repeat 178..239 CDD:276965 16/63 (25%)
KELCH repeat 297..360 CDD:276965 17/64 (27%)
FN3 <1307..>1381 CDD:442628
FN3 <1307..1338 CDD:238020
FN3 1344..1448 CDD:238020
ESPNP_175806.3 PLN02153 1..341 CDD:177814 85/330 (26%)
KELCH repeat 23..68 CDD:276965 14/46 (30%)
KELCH repeat 78..119 CDD:276965 10/40 (25%)
KELCH repeat 128..178 CDD:276965 14/60 (23%)
KELCH repeat 184..232 CDD:276965 8/47 (17%)
KELCH repeat 242..293 CDD:276965 15/60 (25%)
Blue background indicates that the domain is not in the aligned region.

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