DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hcf and ZTL

DIOPT Version :10

Sequence 1:NP_524621.2 Gene:Hcf / 43788 FlyBaseID:FBgn0039904 Length:1500 Species:Drosophila melanogaster
Sequence 2:NP_001154783.1 Gene:ZTL / 835842 AraportID:AT5G57360 Length:626 Species:Arabidopsis thaliana


Alignment Length:277 Identity:82/277 - (29%)
Similarity:125/277 - (45%) Gaps:68/277 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 YGKYSNELYELQATKWEWRKMYPESPDSGLSPCPRLGHSFTMVGEKIFLFGGLANESDDPKNNIP 208
            :|:.:.||..|:|.  .|||:   |....:.| .|...|...||.::.||||      :..|..|
plant   265 WGRLARELTTLEAA--AWRKL---SVGGSVEP-SRCNFSACAVGNRVVLFGG------EGVNMQP 317

  Fly   209 KYLNDLYILDTRGVHSHNGKWIVPKTYGDSPPP-RESHTGISFATKSNGNLNLLIYGGMSGC--- 269
              :||.::||   ::|...:|...|.  .|||| |..||    .|..||: ||:::|   ||   
plant   318 --MNDTFVLD---LNSDYPEWQHVKV--SSPPPGRWGHT----LTCVNGS-NLVVFG---GCGQQ 367

  Fly   270 -RLGDLWLLETDSM--TWSKPKTSGEA-PLPRSLHSS-TMIGNKMYVFGGWVP--LVINDSKSTT 327
             .|.|:::|..|:.  ||.  :.||.| |||||.||| |:.|.|:.|.||...  ::::|:    
plant   368 GLLNDVFVLNLDAKPPTWR--EISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDT---- 426

  Fly   328 EREWKCTNTLAVLDLETMTWENVTLDTVEENVPRARAGHCAVGIQSRLYVWSGR-----DGYRKA 387
                    .|..|.:|...|..:....    .|.:|.||       .|.|:.||     .|..|:
plant   427 --------FLLDLSIEKPVWREIPAAW----TPPSRLGH-------TLSVYGGRKILMFGGLAKS 472

  Fly   388 WNNQVCCKDLWYLEVSK 404
            ...:....|::.:::|:
plant   473 GPLKFRSSDVFTMDLSE 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HcfNP_524621.2 PLN02193 <59..363 CDD:177844 71/229 (31%)
KELCH repeat 74..115 CDD:276965
KELCH repeat 123..175 CDD:276965 9/30 (30%)
KELCH repeat 178..239 CDD:276965 17/60 (28%)
KELCH repeat 297..360 CDD:276965 16/65 (25%)
FN3 <1307..>1381 CDD:442628
FN3 <1307..1338 CDD:238020
FN3 1344..1448 CDD:238020
ZTLNP_001154783.1 PRK13558 <40..>161 CDD:237426
F-box_AtADO-like 196..242 CDD:438925
NanM 293..590 CDD:442289 72/243 (30%)
KELCH repeat 293..341 CDD:276965 17/60 (28%)
KELCH repeat 345..394 CDD:276965 20/58 (34%)
KELCH repeat 397..446 CDD:276965 16/64 (25%)
KELCH repeat 450..502 CDD:276965 11/47 (23%)
KELCH repeat 516..565 CDD:276965
Blue background indicates that the domain is not in the aligned region.

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