Protein Alignment Hcf and NSP1

DIOPT Version :10

• Sequence 1: NP_524621.2
• Gene: Hcf / 43788
• FlyBaseID: FBgn0039904
• Length: 1500
• Species: Drosophila melanogaster
• Sequence 2: NP_566546.1
• Gene: NSP1 / 820887
• AraportID: AT3G16400
• Length: 470
• Species: Arabidopsis thaliana
• Alignment Length: 404
• Identity: 97/404 - (24%)
• Similarity: 154/404 - (38%)
• Gaps: 82/404 - (20%)

  Fly     1 MEGSDFVDPAFSSGERISASDLNSEHIIQAENHSFANRISMDMDVPDGHQL---DSNLTGF---- 58
            ::..|::  .:..|.|...:|:.||.|......:|..:.|..::...|.:.   ...:.||
plant    68 IDADDYI--VYVEGYREKVNDMTSEMITFLSIKTFKGKTSHPIEKRPGVKFVLHGGKIVGFHGRS 130

  Fly    59 ---------------------RWKRVLNPTGPQPRPRHGHRAINIKELMVVFGG---GNEGIVDE 99
                                 :|.:| ...|..|..|..|....:...:..|||   .|:.|...
plant   131 TDVLHSLGAYVSLSSTIKLLGKWIKV-EQKGEGPGLRCSHGIAQVGNKIYSFGGEFTPNQPIDKH 194

  Fly   100 LHVYNTVTNQWYVPVLKGDVPN-GCAAYGFVVEGTRMFVFGGMIEYGKYSNELYELQATKWEWRK 163
            |:|::..|..|.:....||||: .|.....|..|:.::||||.....:| |..|....|..||:.
plant   195 LYVFDLETRTWSISPATGDVPHLSCLGVRMVSVGSTLYVFGGRDASRQY-NGFYSFDTTTNEWKL 258

  Fly   164 MYPESPDSGLSPCPRLGHSFTMVGEKIFLFGGLANESDDPKNNIPKYLNDLYILDTRGVHSHNGK 228
            :.|...    .|.||..||.....|.:::|||::  :....|.:..|    .|:|.        |
plant   259 LTPVEE----GPTPRSFHSMAADEENVYVFGGVS--ATARLNTLDSY----NIVDK--------K 305

  Fly   229 WIVPKTYGDSPPPRESHTGISFATKSNGNLNL------LIYGGMSGCRLGDLWLLETDSMTWSKP 287
            |....|.||           |...:....|.:      ::| |.:||.:.|:...:.....|::.
plant   306 WFHCSTPGD-----------SLTARGGAGLEVVQGKVWVVY-GFNGCEVDDVHYYDPVQDKWTQV 358

  Fly   288 KTSGEAPLPRSLHSSTMIGNKMYVFGGWV---PLVINDSKSTTEREWKCTNTLAVLDLETMTWEN 349
            :|.|..|..||:.:|..||..:.:|||.:   ||........|:      .|.| ||.||:.||.
plant   359 ETFGVRPSERSVFASAAIGKHIVIFGGEIAMDPLAHVGPGQLTD------GTFA-LDTETLQWER 416

  Fly   350 VTLDTVEENVPRAR 363
            :.....||..|.:|
plant   417 LDKFGGEEETPSSR 430

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hcf	NP_524621.2	PLN02193	<59..363	CDD:177844	84/316 (27%)
		KELCH repeat	74..115	CDD:276965	11/43 (26%)
		KELCH repeat	123..175	CDD:276965	14/51 (27%)
		KELCH repeat	178..239	CDD:276965	16/60 (27%)
		KELCH repeat	297..360	CDD:276965	21/65 (32%)
		FN3	<1307..>1381	CDD:442628
		FN3	<1307..1338	CDD:238020
		FN3	1344..1448	CDD:238020
NSP1	NP_566546.1	PLN02193	1..470	CDD:177844	97/404 (24%)
		KELCH repeat	166..211	CDD:276965	11/44 (25%)
		KELCH repeat	221..265	CDD:276965	13/48 (27%)
		KELCH repeat	269..316	CDD:276965	16/71 (23%)
		KELCH repeat	319..358	CDD:276965	7/39 (18%)
		KELCH repeat	368..417	CDD:276965	19/55 (35%)