DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hcf and FBXO42

DIOPT Version :10

Sequence 1:NP_524621.2 Gene:Hcf / 43788 FlyBaseID:FBgn0039904 Length:1500 Species:Drosophila melanogaster
Sequence 2:NP_061867.1 Gene:FBXO42 / 54455 HGNCID:29249 Length:717 Species:Homo sapiens


Alignment Length:937 Identity:188/937 - (20%)
Similarity:311/937 - (33%) Gaps:345/937 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SASDLNSEHIIQAENHSFANRISMDMDVPDGHQLDSNLTGFRWKRVLNPTGPQPRPRHGHRAINI 82
            |:||...:..:..:........:||.|......|::..|                 ||......:
Human     3 SSSDSEDDSFMAVDQEETVLEGTMDQDEEPHPVLEAEET-----------------RHNRSMSEL 50

  Fly    83 KELMVVFGGGNEGIVDELHVYN------TVTNQWYVPVLKGDVPNGCAAYGF---VVEGT----- 133
            .|.::      |.|:..|..|.      .|..||| .::|| |.:.| .:||   |.||.     
Human    51 PEEVL------EYILSFLSPYQEHKTAALVCKQWY-RLIKG-VAHQC-YHGFMKAVQEGNIQWES 106

  Fly   134 -------------------------RMFVFGGMIEYGKYS--NELYELQATKWEWRKMYPESPDS 171
                                     .|:||||..:....:  |:|:.|.....||.:...    |
Human   107 RTYPYPGTPITQRFSHSACYYDANQSMYVFGGCTQSSCNAAFNDLWRLDLNSKEWIRPLA----S 167

  Fly   172 GLSPCPRLGHSFTMVGEKIFLFGGLANESDDPKNNIPKYLNDLYILDTRGVHSHNGKW--IVPKT 234
            |..|.|:.|.:..:..:.:.||||....|..|.:...::.::::      .:|.:..|  .:..|
Human   168 GSYPSPKAGATLVVYKDLLVLFGGWTRPSPYPLHQPERFFDEIH------TYSPSKNWWNCIVTT 226

  Fly   235 YGDSPPPRESHTGISFATKSNGNLNLLIYGGMSGCR--LGDLWLLETDSMTWSKPKTSGEAPLPR 297
            :|  |||...|:......|      ::::||..|.|  ..|:|:|:.:...||||..||.:|.||
Human   227 HG--PPPMAGHSSCVIDDK------MIVFGGSLGSRQMSNDVWVLDLEQWAWSKPNISGPSPHPR 283

  Fly   298 SLHSSTMIGNKMYVFGGWVPLVINDSKSTTEREWKCTNTLAVLDLETMTWENVTLDTVEENVPRA 362
                           ||...:||:|:            |:.:|                      
Human   284 ---------------GGQSQIVIDDA------------TILIL---------------------- 299

  Fly   363 RAGHCAVGIQSRLYVWSGRDGYRKAWNNQVCCKDLWYLEVSKPLYAVKVALVRASTHALELSWTA 427
              |.|  |..:.|:                  ||.|.|.:....:|.:...|....|.....|  
Human   300 --GGC--GGPNALF------------------KDAWLLHMHSGPWAWQPLKVENEEHGAPELW-- 340

  Fly   428 TTFAAAYVLQIQKIEQPLNTSSKLLSNNIVQQGTPTSAETSGINISANRSGSALGLGVEATSTVL 492
             ...|..|.|...:.....:....||.::..:.:|.||                        |..
Human   341 -CHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISA------------------------TPP 380

  Fly   493 KLEKESLQLSGCQPETNVQ--PSVN---DLLQSMSQPSSPA---------SRADKDPLSSGGGTT 543
            .|..|:.:.....|..::.  |.||   ..|:..:|..:|:         :|.|..|:.:||   
Human   381 ALVPETREYRSQSPVRSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGG--- 442

  Fly   544 FNLSTSVASVHPQISVISSTAAVTGNDTASPSGAINSILQKFRPVVTAVRTSTTTA--------- 599
                          |:...||||.|:...||              |.|:..||.:|         
Human   443 --------------SLSPGTAAVGGSSLDSP--------------VQAISPSTPSAPEGYDLKIG 479

  Fly   600 VSIAT---STSDPLSVRVPS-TMSANVVLSSSSSTLRIVPSVTASHSLRIASSQASGNNCRSSSA 660
            :|:|.   |..|...:|:.| .::.::..:|||:.:..:.:.|...|:|....|.:|.:      
Human   480 LSLAPRRGSLPDQKDLRLGSIDLNWDLKPASSSNPMDGMDNRTVGGSMRHPPEQTNGVH------ 538

  Fly   661 INILKTALPNVAVQSQPTSSTTTSIGGKQYFIQKPLTLAPNVQLQFVKTSGGMTVQTLPKVNFTA 725
                  ..|:||          :::.|                    ..|.|...::|..:...:
Human   539 ------TPPHVA----------SALAG--------------------AVSPGALRRSLEAIKAMS 567

  Fly   726 SKG-------TPPHGISIANP---HLASGITQIQGSTVPGSQIQKPIVS---GNVLKLVS----- 772
            |||       :||.|.|..:|   .|:|      |.|||   |.:|..:   |:.|..::     
Human   568 SKGPSASAALSPPLGSSPGSPGSQSLSS------GETVP---IPRPGPAQGDGHSLPPIARRLGH 623

  Fly   773 --PHTMAGGKLIMKNSNI--LQM-----------GKVTPNVMG-----GKPAFVITNKQGTPLGN 817
              |.::..||.:.::.|.  :||           |:|...|..     |.|.   |:......|.
Human   624 HPPQSLNVGKPLYQSMNCKPMQMYVLDIKDTKEKGRVKWKVFNSSSVVGPPE---TSLHTVVQGR 685

  Fly   818 QQIIIVTTGG------NVRSVPTSTVM 838
            .::||.  ||      ||:..|.:..:
Human   686 GELIIF--GGLMDKKQNVKYYPKTNAL 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HcfNP_524621.2 PLN02193 <59..363 CDD:177844 73/348 (21%)
KELCH repeat 74..115 CDD:276965 11/46 (24%)
KELCH repeat 123..175 CDD:276965 18/86 (21%)
KELCH repeat 178..239 CDD:276965 11/62 (18%)
KELCH repeat 297..360 CDD:276965 8/62 (13%)
FN3 <1307..>1381 CDD:442628
FN3 <1307..1338 CDD:238020
FN3 1344..1448 CDD:238020
FBXO42NP_061867.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34 6/30 (20%)
F-box_FBXO42 47..84 CDD:438882 9/43 (21%)
NanM 110..>313 CDD:442289 59/291 (20%)
KELCH repeat 119..168 CDD:276965 10/52 (19%)
Kelch 1 132..184 15/55 (27%)
KELCH repeat 174..229 CDD:276965 11/62 (18%)
Kelch 2 186..242 14/63 (22%)
KELCH repeat 232..271 CDD:276965 9/44 (20%)
Kelch 3 244..293 20/63 (32%)
Kelch 4 295..342 14/93 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 361..474 33/167 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 570..631 17/69 (25%)
Blue background indicates that the domain is not in the aligned region.

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