DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hcf and klhdc10

DIOPT Version :10

Sequence 1:NP_524621.2 Gene:Hcf / 43788 FlyBaseID:FBgn0039904 Length:1500 Species:Drosophila melanogaster
Sequence 2:XP_005164752.1 Gene:klhdc10 / 393231 ZFINID:ZDB-GENE-040426-776 Length:424 Species:Danio rerio


Alignment Length:284 Identity:73/284 - (25%)
Similarity:112/284 - (39%) Gaps:40/284 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 HGHRAINIKELMVVFG------GGNEGIVDELHVYNTVTNQWYVPVLKGDVPNGCAAYGFVVEGT 133
            ||:.       ::|||      |.|.|  :::||.|....:|.:...:|..||........:...
Zfish   144 HGNN-------LLVFGGTGIPFGENNG--NDVHVCNVKYKRWSLLNCRGKKPNRIYGQAMAIISG 199

  Fly   134 RMFVFGGMIEYGKYSNELYELQATKWEWRKMYPESPDSGLSPCPRLGHSFTMVGEKIFLFGGLAN 198
            .::||||...| .||.:|:.|..|..||..:.|.:|...| |..|..|.....|::|::.||..:
Zfish   200 FLYVFGGTTGY-IYSTDLHRLDLTTREWIHLKPNNPPDDL-PEERYRHEIAHDGQRIYILGGGTS 262

  Fly   199 ESDDPKNNIPKYLNDLYILDTRGVHSHNGKWIVPKTYGDSPPPRESHTGISFATKSNGNLNLLIY 263
            .:..|.:.|     ..|.|:|........|   |......|.||..|:.:....      ::.|.
Zfish   263 WTSYPLDKI-----HAYNLETNSWEEITTK---PHERIGYPAPRRCHSCVQIKN------DVFIC 313

  Fly   264 GGMSG-CRLGDLWLLETDSMTWSKPKTSGEAPLPRSLHSSTMI-GNKMYVFGGWVPLVINDSKST 326
            ||.:| ..|.|||.:...:..|.  |.....|.|...|.:.:. ...||:.||.|.:..|....:
Zfish   314 GGYNGEVILDDLWKVNLQTFQWH--KLPAVMPEPAYFHCAAVTPAGCMYIHGGVVNIHENKRTGS 376

  Fly   327 TEREWKCTNTLAVLDLETMTWENV 350
            ..:.|     |.|..|..:.||.:
Zfish   377 LFKIW-----LVVPSLLELCWERL 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HcfNP_524621.2 PLN02193 <59..363 CDD:177844 73/284 (26%)
KELCH repeat 74..115 CDD:276965 12/45 (27%)
KELCH repeat 123..175 CDD:276965 15/51 (29%)
KELCH repeat 178..239 CDD:276965 13/60 (22%)
KELCH repeat 297..360 CDD:276965 13/55 (24%)
FN3 <1307..>1381 CDD:442628
FN3 <1307..1338 CDD:238020
FN3 1344..1448 CDD:238020
klhdc10XP_005164752.1 NanM <72..317 CDD:442289 51/197 (26%)
KELCH repeat 74..132 CDD:276965
KELCH repeat 136..186 CDD:276965 13/50 (26%)
KELCH repeat 190..238 CDD:276965 14/48 (29%)
KELCH repeat 242..295 CDD:276965 13/60 (22%)
Kelch_1 297..339 CDD:396078 13/49 (27%)
KELCH repeat 298..344 CDD:276965 12/53 (23%)
Blue background indicates that the domain is not in the aligned region.

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