Sequence 1: | NP_524621.2 | Gene: | Hcf / 43788 | FlyBaseID: | FBgn0039904 | Length: | 1500 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006229655.1 | Gene: | Hcfc1 / 363519 | RGDID: | 1563804 | Length: | 2091 | Species: | Rattus norvegicus |
Alignment Length: | 2143 | Identity: | 641/2143 - (29%) |
---|---|---|---|
Similarity: | 881/2143 - (41%) | Gaps: | 799/2143 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 59 RWKRVLNPTGPQPRPRHGHRAINIKELMVVFGGGNEGIVDELHVYNTVTNQWYVPVLKGDVPNGC 123
Fly 124 AAYGFVVEGTRMFVFGGMIEYGKYSNELYELQATKWEWRKMYPESPDSGLSPCPRLGHSFTMVGE 188
Fly 189 KIFLFGGLANESDDPKNNIPKYLNDLYILDTR---GVHSHNGKWIVPKTYGDSPPPRESHTGISF 250
Fly 251 ATKSNGNLNLLIYGGMSGCRLGDLWLLETDSMTWSKPKTSGEAPLPRSLHSSTMIGNKMYVFGGW 315
Fly 316 VPLVINDSK-STTEREWKCTNTLAVLDLETMTWENVTLDTVEENVPRARAGHCAVGIQSRLYVWS 379
Fly 380 GRDGYRKAWNNQVCCKDLWYLEVSKPLYAVKVALVRASTHALELSWTATTFAAAYVLQIQKIEQP 444
Fly 445 LN--TSSKLLSN------------------------------NIVQQGTPTSAETSGINISANRS 477
Fly 478 GSALGLGVEATS----TVLKLEKESLQLSGCQPETNVQPSVNDLLQSMSQPSSPASRADKDPLSS 538
Fly 539 GGGTTFNLSTSVASVHP----QISVISSTAAVTGNDT-ASPSGAINSILQKFRPVVTAVRTSTTT 598
Fly 599 AVSIAT---STSDPLSVRVPSTMSANVVLSSSSSTLRIVPSVTASHSLRIASSQASGNNCRSSSA 660
Fly 661 INILKTALPNVAVQSQPTSSTTTSIGGKQYFIQKPLTLAPNVQLQFVKTSGGMTVQTLPKVNFTA 725
Fly 726 SKGTPPHGISI--ANPHLASGITQIQGSTVPGSQI---QKPIVSGNVLKL--------------- 770
Fly 771 ----------------VSPHTMAGG-----KLIMKNSNILQMGK---------------VTPNVM 799
Fly 800 ---GGKPAFVIT---------NKQG-------------------TPLGNQQII------------ 821
Fly 822 ---IV--TTGGNVRSVPTSTVMTSAGGSASGTNIVS-----------------IVNSTSTTPSPL 864
Fly 865 Q----ALSG---------------QKTLISNQSGVK----------MLRNISSVQASSSMAF--- 897
Fly 898 --GQKQSGTPI-----------------------------------------HQKTALYI----- 914
Fly 915 ---GGKAVTVMS-----------TNTSMAASGN-------------------------------- 933
Fly 934 ----------------KVMVLPG--------------TSSNNSPATTTALSA-----------RK 957
Fly 958 SFVFNAGG-SPRTVTLATKSI------------------------------------------NA 979
Fly 980 KSIPQSQ---------------------------------------------------------- 986
Fly 987 ----PVTETN----NHSVAT-----------------------------------------IKDT 1002
Fly 1003 DPMDDIIEQ----------LDGAGDLLKLS---------------ESEGQH-------------- 1028
Fly 1029 ----GSEENE---NNGENATSSSASALFTGGDTAGPSRAQNPIVMEHPVDIIEDVSGVSSTTDVN 1086
Fly 1087 ETAIVS----------------------------------------------------------G 1093
Fly 1094 DTIESLKMSE----KENDDVKSMGEKSILSDDC------------HQPTTSE------------- 1129
Fly 1130 -----------------------TEAATILTTIKSAEALV-------------------LETAEI 1152
Fly 1153 RKDHTGCTIGSLKENQDENKK---------------FKQRQESSPSQNIHQFQ------------ 1190
Fly 1191 -----NVDGSQLEALASA-----ALLQAATSDT-----TALALKELIERPESETNTRSSNIAEIQ 1240
Fly 1241 QNNVQSTLAV---VVPNTS----QNENQKWHTVGVFKDLSHTVTSYI---DSNCISDSFFDGIDV 1295
Fly 1296 DNLPDFSKFPRTNLEPGTAYRFRLSAINSCGRGEWGEISSFKTCLPGFPGAPSAIKISKDVKEGA 1360
Fly 1361 HLTWEPPPAQKTKEIIEYSVYLAVKPT--AKDKALSTP-QLAFVRVYVGAANQCTVPNASLSNAH 1422
Fly 1423 VDCSNKPAIIFRIAARNQKGYGPATQVRWLQD---------PAAAKQHTPTVTPNLKRGPEKS 1476 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hcf | NP_524621.2 | Kelch_1 | 73..110 | CDD:279660 | 32/36 (89%) |
KELCH repeat | 74..115 | CDD:276965 | 34/40 (85%) | ||
KELCH repeat | 123..175 | CDD:276965 | 33/51 (65%) | ||
Kelch_3 | 132..184 | CDD:290151 | 34/51 (67%) | ||
Kelch_5 | 175..221 | CDD:290565 | 36/48 (75%) | ||
KELCH repeat | 178..239 | CDD:276965 | 40/63 (63%) | ||
Kelch_3 | 260..305 | CDD:290151 | 32/44 (73%) | ||
KELCH repeat | 297..360 | CDD:276965 | 44/63 (70%) | ||
Kelch_3 | 306..371 | CDD:290151 | 47/65 (72%) | ||
FN3 | <1307..1338 | CDD:238020 | 18/30 (60%) | ||
FN3 | 1344..1448 | CDD:238020 | 67/106 (63%) | ||
Hcfc1 | XP_006229655.1 | PLN02153 | 12..330 | CDD:177814 | 214/315 (68%) |
Kelch_1 | 32..69 | CDD:279660 | 32/36 (89%) | ||
KELCH repeat | 33..80 | CDD:276965 | 36/46 (78%) | ||
KELCH repeat | 84..134 | CDD:276965 | 31/49 (63%) | ||
Kelch_3 | 91..145 | CDD:290151 | 35/53 (66%) | ||
Kelch_5 | 134..179 | CDD:290565 | 35/44 (80%) | ||
KELCH repeat | 137..196 | CDD:276965 | 40/62 (65%) | ||
KELCH repeat | 200..253 | CDD:276965 | 30/52 (58%) | ||
Kelch_3 | 215..263 | CDD:290151 | 32/47 (68%) | ||
KELCH repeat | 255..319 | CDD:276965 | 44/63 (70%) | ||
Kelch_3 | 264..330 | CDD:290151 | 47/65 (72%) | ||
Kelch_5 | 319..>351 | CDD:290565 | 27/31 (87%) | ||
KELCH repeat | 322..367 | CDD:276965 | 37/44 (84%) | ||
FN3 | <1912..1941 | CDD:238020 | 18/28 (64%) | ||
FN3 | 1947..2052 | CDD:238020 | 67/106 (63%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 108 | 1.000 | Domainoid score | I6338 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 659 | 1.000 | Inparanoid score | I736 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D202078at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002961 | |
OrthoInspector | 1 | 1.000 | - | - | oto96657 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR46003 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X2316 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
9 | 9.160 |