DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hcf and krcp

DIOPT Version :10

Sequence 1:NP_524621.2 Gene:Hcf / 43788 FlyBaseID:FBgn0039904 Length:1500 Species:Drosophila melanogaster
Sequence 2:XP_005172311.1 Gene:krcp / 323406 ZFINID:ZDB-GENE-030131-2126 Length:538 Species:Danio rerio


Alignment Length:385 Identity:83/385 - (21%)
Similarity:148/385 - (38%) Gaps:126/385 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FSSGERISASDLNSEHIIQAENHSFANRISMDMDVPDGHQLDSNLTGFRWKRVLNPTGPQPRPRH 75
            |...|..:|:..:..|..:::....::: :..:|.|.|          ||.:.|.|..||     
Zfish   180 FPQKEEQTATSASQNHKTKSKQTKTSSQ-TAQLDKPSG----------RWGQTLCPIDPQ----- 228

  Fly    76 GHRAINIKELMVVFGGGNEGIVDELHVYNTVTNQWYVPVLKGDVPNGCAAYGFVVEGTRMFVFGG 140
                     ..::.||                                       :|.||     
Zfish   229 ---------TAILIGG---------------------------------------QGARM----- 240

  Fly   141 MIEYGKYSNELYELQATKWEWRKMYPESPDSGLSPCPRLGHSFTMVGE--KIFLFGGLANESDDP 203
              ::.|  :.:::|......|  :..|:...|.:|..|:||:.|...|  :||:|||..::    
Zfish   241 --QFCK--DPIWKLCTEDLSW--VPAETLAEGPTPEARIGHTATYDPESKRIFVFGGSKHK---- 295

  Fly   204 KNNIPKYLNDLYILDTRGVHSHNGKWIVPKTYGDSPPPRESHTGISFATKSNGNLNLLIYGGM-- 266
                 |:.||::||||:     :.:|.:.:..|..||       :::.:.|.....|.::||:  
Zfish   296 -----KWFNDVHILDTQ-----SWRWTLVEAQGKVPP-------LAYHSCSMFRGELFVFGGVFP 343

  Fly   267 ------SGCRLGDLWLLETDSMTWSKPKTSGEAPLPRSLHSSTMIGNKMYVFGGW-VPLVINDSK 324
                  .||. ..:::...:...|.:|..:||.|.|||.||:.::..:::||||| .|:      
Zfish   344 RPHPEPDGCS-DSIYIFNPEMAIWYQPIVNGEKPAPRSGHSACVMQGRIFVFGGWDTPV------ 401

  Fly   325 STTEREWKCTNTLAVLDLETMTWENVTLDTVEENVPRARAGH-CAVGIQSRLYVWSGRDG 383
                    |.|.:.:|||..|.:..|   ......|..|:.| |||..:|...:..|.:|
Zfish   402 --------CFNDMFMLDLGLMEFSPV---KTSGTAPSPRSWHGCAVLSESSFLIHGGYNG 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HcfNP_524621.2 PLN02193 <59..363 CDD:177844 68/314 (22%)
KELCH repeat 74..115 CDD:276965 2/40 (5%)
KELCH repeat 123..175 CDD:276965 8/51 (16%)
KELCH repeat 178..239 CDD:276965 19/62 (31%)
KELCH repeat 297..360 CDD:276965 17/63 (27%)
FN3 <1307..>1381 CDD:442628
FN3 <1307..1338 CDD:238020
FN3 1344..1448 CDD:238020
krcpXP_005172311.1 Kelch_4 216..263 CDD:433191 16/120 (13%)
NanM 266..530 CDD:442289 61/224 (27%)
KELCH repeat 272..323 CDD:276965 21/71 (30%)
KELCH repeat 324..370 CDD:276965 7/46 (15%)
KELCH repeat 379..426 CDD:276965 17/63 (27%)
KELCH repeat 429..471 CDD:276965 8/22 (36%)
Blue background indicates that the domain is not in the aligned region.

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