DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hcf and Klhdc2

DIOPT Version :10

Sequence 1:NP_524621.2 Gene:Hcf / 43788 FlyBaseID:FBgn0039904 Length:1500 Species:Drosophila melanogaster
Sequence 2:NP_001029305.1 Gene:Klhdc2 / 299113 RGDID:1306504 Length:406 Species:Rattus norvegicus


Alignment Length:408 Identity:105/408 - (25%)
Similarity:163/408 - (39%) Gaps:104/408 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 PRPRHGHRAINIKELMVVFGG--GNE--GIVD------ELHVYNTVTNQWYVPVLKGDVPNGCAA 125
            |..|.||.|::....|.|:||  .|:  |:.|      ||.:||..|.:|.....:||||...:.
  Rat    29 PAERSGHVAVSDGRHMFVWGGYKSNQVRGLYDFYLPREELWIYNMETGRWKKINTEGDVPPSMSG 93

  Fly   126 YGFVVEGTRMFVFGGMIEYGKYSNELYEL------QATKWE---WRKMYPESPDSGLSPCPRLGH 181
            ...|.....:::|||....|. :|:.|.|      :..:||   .:.:.|.|.|       :|| 
  Rat    94 SCAVCVDRVLYLFGGHHSRGN-TNKFYMLDSRSADRVLQWERIDCQGIPPSSKD-------KLG- 149

  Fly   182 SFTMVGEKIFLFGGLANESDDP-------------KNNIPKYLND-LYILDTRGVHSHNGKWIVP 232
             ..:...|:..|||.....:|.             .::.|:..|| ::||||     ....|..|
  Rat   150 -VWVYKNKLIFFGGYGYLPEDKVLGTFEFDETSFWNSSHPRGWNDHVHILDT-----ETFAWSQP 208

  Fly   233 KTYGDSPPPRESHTGISFATKSNGNLNLLIYGGMSGCRLGDLWLLETDSMTWSKPKTSGEAPLPR 297
            .|.|.:|.||.:|     |..:.||...:..|.....|:.||..|..|:..|::....|..|:.|
  Rat   209 ITTGKAPSPRAAH-----ACATVGNKGFVFGGRYRDARMNDLHYLNLDTWEWNELIPQGICPVGR 268

  Fly   298 SLHSSTMI-GNKMYVFGGWVPLVINDSKSTTERE-----WKCTNTLAVLDLETMTWENVTLDTVE 356
            |.||.|.: .:.:::|||:          |||::     |    |..:...|   |.......||
  Rat   269 SWHSLTPVSSDHLFLFGGF----------TTEKQPLSDAW----TYCISKNE---WIQFNHPYVE 316

  Fly   357 ENVPRARAGHCAVGIQSRLYVWSGRDG-----YRKAWNNQVCCKDLWYLEVSKPLYAVK-VALVR 415
            :  ||.....|| ..:..:.|:.|...     :|.|.:|:|.            :::|: .:|||
  Rat   317 K--PRLWHTACA-SDEGEVIVFGGCANNLLVHHRAAHSNEVL------------IFSVQPKSLVR 366

  Fly   416 ASTHA-------LELSWT 426
            .|..|       |..||:
  Rat   367 LSLEAVICFKEMLANSWS 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HcfNP_524621.2 PLN02193 <59..363 CDD:177844 88/330 (27%)
KELCH repeat 74..115 CDD:276965 17/50 (34%)
KELCH repeat 123..175 CDD:276965 13/60 (22%)
KELCH repeat 178..239 CDD:276965 18/74 (24%)
KELCH repeat 297..360 CDD:276965 17/68 (25%)
FN3 <1307..>1381 CDD:442628
FN3 <1307..1338 CDD:238020
FN3 1344..1448 CDD:238020
Klhdc2NP_001029305.1 Kelch 1. /evidence=ECO:0000250|UniProtKB:Q9Y2U9 31..85 17/53 (32%)
KELCH repeat 32..91 CDD:276965 21/58 (36%)
Kelch_4 32..89 CDD:433191 20/56 (36%)
NanM 78..341 CDD:442289 75/302 (25%)
KELCH repeat 92..138 CDD:276965 10/46 (22%)
Kelch 2. /evidence=ECO:0000250|UniProtKB:Q9Y2U9 92..136 10/44 (23%)
Kelch 3. /evidence=ECO:0000250|UniProtKB:Q9Y2U9 148..207 15/65 (23%)
KELCH repeat 218..265 CDD:276965 13/51 (25%)
Kelch 4. /evidence=ECO:0000250|UniProtKB:Q9Y2U9 221..259 11/42 (26%)
Kelch 5. /evidence=ECO:0000250|UniProtKB:Q9Y2U9 271..311 13/56 (23%)
Kelch 6. /evidence=ECO:0000250|UniProtKB:Q9Y2U9 322..359 8/49 (16%)
Blue background indicates that the domain is not in the aligned region.

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