DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hcf and Klhdc1

DIOPT Version :10

Sequence 1:NP_524621.2 Gene:Hcf / 43788 FlyBaseID:FBgn0039904 Length:1500 Species:Drosophila melanogaster
Sequence 2:NP_839984.1 Gene:Klhdc1 / 271005 MGIID:2672853 Length:406 Species:Mus musculus


Alignment Length:433 Identity:99/433 - (22%)
Similarity:178/433 - (41%) Gaps:106/433 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 RHGHRAINIKELMVVFGG-----GNEGIV--DELHVYNTVTNQWYVPVLKGDVPNGCA-AYGFVV 130
            |.||.|:.....:.|:||     .||..:  ||:..|:..:..|.:.:::|::|...: :.|..:
Mouse    13 RSGHCAVVDGHFLYVWGGYVSIEDNEVYLPNDEMWTYDIDSGLWKMHLMEGELPPSMSGSCGACI 77

  Fly   131 EGTRMFVFGGMIEYGKYSNELY----ELQATKWEWRKMYPESPDSGLSPCPRLGHSFTMVGEKIF 191
            .| |::||||..:.| |||.||    ..:...:.|.|:   :...|..|.||...|..:..:::.
Mouse    78 HG-RLYVFGGYDDKG-YSNRLYFVNLRTRDGTYTWEKI---TKFDGQPPTPRDKLSCWVYKDRLI 137

  Fly   192 LFGGL-------------ANESDDPKNNIPKYLNDLYILDTRGVHSHNGKWIVPKTYGDSPP-PR 242
            .|||.             .:::...:.....:.||:::.||:     ...|..|:..|..|| ||
Mouse   138 YFGGYGYRRHSELQECFDVHDASWEEQIFWGWHNDVHVFDTK-----TRTWSQPEIKGGVPPQPR 197

  Fly   243 ESHTGISFATKSNGNLNLLIYGG-MSGCRLGDLWLLETDSMTWS-KPKTSGEAPLPRSLHSSTMI 305
            .:|:......|.      .::|| :...|:.||..|..|:..|| :...:||:|..||.|:.|.|
Mouse   198 AAHSCAVLGNKG------YVFGGRVLQTRMNDLHYLNLDTWVWSGRISVNGESPKHRSWHTLTAI 256

  Fly   306 -GNKMYVFGGWVPLVINDSKSTTEREWKCTNTLAVLDLETMTWENVTLDTVEENVP--RARAGHC 367
             .:|:::|||     :|.........|       :.::.|..|:.:      .::|  |.|..|.
Mouse   257 TDDKLFLFGG-----LNADNIPLSDGW-------IHNITTNCWKQL------RHLPYTRPRLWHT 303

  Fly   368 A-VGIQSRLYVWSG-RD-------GYRKAWNNQVCCKDLWYLEVSKPLYAVKVALVRASTHALEL 423
            | :|.::.:.|:.| :|       |:         |.||...: ::|...::..|.....:|:.|
Mouse   304 ACLGKENEIMVFGGSKDNLLFLDTGH---------CNDLLIFQ-TQPYSLLRSCLDCIGKNAIIL 358

  Fly   424 S--------------------WTATTFAAAYVLQIQKIE--QP 444
            .                    |||..:.....::.::.|  ||
Mouse   359 KSQISLLPPKLLQQVLKKITFWTAANYRKEQRIRKEETENNQP 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HcfNP_524621.2 PLN02193 <59..363 CDD:177844 78/319 (24%)
KELCH repeat 74..115 CDD:276965 13/47 (28%)
KELCH repeat 123..175 CDD:276965 16/56 (29%)
KELCH repeat 178..239 CDD:276965 12/73 (16%)
KELCH repeat 297..360 CDD:276965 13/63 (21%)
FN3 <1307..>1381 CDD:442628
FN3 <1307..1338 CDD:238020
FN3 1344..1448 CDD:238020
Klhdc1NP_839984.1 NanM 10..321 CDD:442289 84/341 (25%)
KELCH repeat 13..66 CDD:276965 14/52 (27%)
Kelch 1 24..76 12/51 (24%)
KELCH repeat 70..120 CDD:276965 16/54 (30%)
Kelch 2 80..134 18/57 (32%)
Kelch 3 135..181 7/50 (14%)
KELCH repeat 197..245 CDD:276965 14/53 (26%)
Kelch 4 208..258 18/55 (33%)
KELCH repeat 248..295 CDD:276965 13/64 (20%)
Kelch 5 260..307 13/64 (20%)
Kelch 6 311..361 11/59 (19%)
Blue background indicates that the domain is not in the aligned region.

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