DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hcf and tea1

DIOPT Version :10

Sequence 1:NP_524621.2 Gene:Hcf / 43788 FlyBaseID:FBgn0039904 Length:1500 Species:Drosophila melanogaster
Sequence 2:NP_588351.1 Gene:tea1 / 2539047 PomBaseID:SPCC1223.06 Length:1147 Species:Schizosaccharomyces pombe


Alignment Length:1371 Identity:263/1371 - (19%)
Similarity:451/1371 - (32%) Gaps:449/1371 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 HSFANRISMDMDVPDGHQ-----LDSNLTGFRWKRVLNPTGPQPRPRHGHRAINIKE---LMVVF 89
            ||..:.:.|.......|:     ..|::|...|.::.........||:.|.:....|   .:.:|
pombe    34 HSHESNVKMSTSTVTEHRKKPTGSGSHITASPWSKLTVRGSSNVLPRYSHASHLYAEGGQEIYIF 98

  Fly    90 GG--GNEGIVDELHVYNTVTNQWYVPVLKGDVPNGCAAYGFVVEGTRMFVFGGMIEY---GKYSN 149
            ||  .:....::|.|.|..|:|:......|:.|:....:..::.|....||||:..:   .:..|
pombe    99 GGVASDSQPKNDLWVLNLATSQFTSLRSLGETPSPRLGHASILIGNAFIVFGGLTNHDVADRQDN 163

  Fly   150 ELYELQATKWEWRKMYPESPDSGLSPCPRLGHSFTMVGEKIFLFGGLANESDDPKNNIPKYLNDL 214
            .||.|..:...|:|    :..||..|..|.||:.:.:|.||.||||         ..:..|.|||
pombe   164 SLYLLNTSSLVWQK----ANASGARPSGRYGHTISCLGSKICLFGG---------RLLDYYFNDL 215

  Fly   215 YILDTRGVHSHNGKWIVPKTYGDSPPPRESHTGISFATKSNGNLNLLIYGGMSGCR-LGDLWLLE 278
            ...|...:::.:.:|.:.....|.||.|..|...:|:.|      |.|:||..|.. ..|||...
pombe   216 VCFDLNNLNTSDSRWELASVVNDPPPARAGHVAFTFSDK------LYIFGGTDGANFFNDLWCYH 274

  Fly   279 TDSMTWSKPKTSGEAPLPRSLHSSTMIGNKMYVFGGWVPLVINDSKSTTEREWKCTNTLAVLDLE 343
            .....|||.:|.|.||.||:.|:::::...:|||||                             
pombe   275 PKQSAWSKVETFGVAPNPRAGHAASVVEGILYVFGG----------------------------- 310

  Fly   344 TMTWENVTLDTVEENVPRARAGHCAVGIQSRLYVWSGRDGYRKAWNNQVCCKDLWYLEVSKPLYA 408
                             ||..|                                   .....|||
pombe   311 -----------------RASDG-----------------------------------TFLNDLYA 323

  Fly   409 VKVALVRASTHALELSWTATTFAAAYVLQIQKIEQPLNTSSKLLSNNIVQQGTPTSAET---SGI 470
            .::    :|.|..:||                 :.|...|             |.|:.|   ||:
pombe   324 FRL----SSKHWYKLS-----------------DLPFTPS-------------PRSSHTLSCSGL 354

  Fly   471 NISANRSGSALGLGVEATSTVLKLEKESLQL------SGCQPET--------NVQPSV-NDLLQS 520
            .:..  .|...|.|. :.|.|..|:....:|      ||.|..|        |..||. |.||.|
pombe   355 TLVL--IGGKQGKGA-SDSNVYMLDTSRFRLGSVPTTSGRQRNTSFFSNSTGNTNPSAFNGLLTS 416

  Fly   521 MSQPSSPASRA------DKDPLSSGGGTTFNLSTSVASVHPQISV-ISSTAAVTGNDTASPSGAI 578
            ...||...|:.      .:........:.||      :.|..||. :|..|:   ||..||    
pombe   417 SRIPSYNGSKVRSTSHPSRQQYIGSSNSRFN------TRHQTISTPVSGRAS---NDLPSP---- 468

  Fly   579 NSILQKFRPVVTAVRTSTTT----AVSIATSTSDPLSVRVPSTMSANVVLSSS--------SSTL 631
                      |...|:::::    :.::.:.:||..:.......|.|....|:        |.||
pombe   469 ----------VVPTRSNSSSILQPSYNLNSHSSDRRNTNDDDQSSLNSQQLSNQAKAQGEVSPTL 523

  Fly   632 RIVPSVTASHSLRIAS-SQASGNNCRSSSAINILKTALPNVAVQSQPTSSTTT-----SIGGK-- 688
            ..|||   |||:...: |.||.||.:|.:|...:.:......|:....||..|     |:.|:  
pombe   524 SFVPS---SHSMEQGNGSVASANNAQSEAATRSINSISEVSEVRFPEQSSVKTVDERKSLDGRIT 585

  Fly   689 ----QYFIQKPLTLAPNVQLQFVKTS-GGMTVQTLPKVNFTASKGTPPHGISIANPHLASGITQI 748
                :..::|...|:....:::.|:. ..:...:..|::....|      :.:||....:.:.:.
pombe   586 SVTLETLVEKYSELSKQQIVEWFKSKLYEILRDSASKIDSLTEK------LKVANAEKNAALCEA 644

  Fly   749 QGSTVPGSQIQKPIVSGNVLKLVSPHTMAGGKLIMKNSNILQMGKVTPNVMGGKPAFVITNKQGT 813
            ....||                            :...|.|..|           .|...:|:  
pombe   645 ALEKVP----------------------------LAKHNKLSDG-----------TFSTPDKE-- 668

  Fly   814 PLGNQQIIIVTTGGNVRSVPTSTVMTSAGGSASGTNIVSIVNSTST---------TPSP----LQ 865
                          ||:|...:.:|..   :.|....:.::..||:         |.|.    :|
pombe   669 --------------NVQSTNDAHIMQE---NFSLHKALEVMRETSSDLDKQLKDATASQKELIVQ 716

  Fly   866 ALSGQKTLISNQSG----VKMLRNISSVQASSSM------------------------AFGQKQS 902
            ..|.||.|:..:..    .|.|:.|.|:.....:                        .|.::..
pombe   717 TSSFQKELVEERERHNAISKRLQEIESLYRDRELLVTNLEDQLVDQTVTINKFAFERDQFRERSM 781

  Fly   903 GTPIHQKTALYIGGKAVTVMSTNTSMAASGNKVMVLPGTSSNNSPATTTAL----SARKSFVFNA 963
            |   .:.|...:..|.......|.|:..|...|.     :.|:...|..||    ..:|..:.:|
pombe   782 G---FENTIKDLTRKMEATDMLNVSLHESLRSVQ-----TENSELVTEMALLKAELVKKQAIIDA 838

  Fly   964 GGSPRTVTLATKSINAKSIPQSQPVTETNNHSVATIKDTDPMDDIIEQLDGAGDLLKLSESEGQH 1028
                          || :|........||..:|:...:.:..:.:.:.|:|:.| .|.:|.|..|
pombe   839 --------------NA-NIYDKLTADHTNYETVSADINQNLKETLDKLLNGSSD-FKNNEIELLH 887

  Fly  1029 GSEENENNGENATSSSASALFTGGDTAGPSRAQNPIVMEHPVDIIEDVSGVSSTTDVNETAIVSG 1093
                ::....||.......|....                  ..|||    :..:::.|.|    
pombe   888 ----DQIRITNAKLEKREKLINAS------------------KYIED----TLRSEIQEAA---- 922

  Fly  1094 DTIESLKMS----EKENDDV----------KSMGEKSILSDDCHQPTTSETEAATILTTIKSAEA 1144
            :.:.:|:.|    ::||.::          ::.|.|.:::... |.:|:.:|...:...:::. |
pombe   923 EKVSNLEFSNFNLKEENSNMQLQLMKALEQRNTGAKQLVNLRM-QLSTATSELDMLKLKLRTT-A 985

  Fly  1145 LVLETAE---------IRKD-------HTGC-----TIGSLKEN---------------QDENKK 1173
            |.||.:.         :|.|       |..|     |:..:|..               ::.:.|
pombe   986 LALEESPDDYSDILSILRADMSPFHDLHKQCGVLIDTLNGVKRGFGIFEKKFTDYHKFLENISDK 1050

  Fly  1174 FKQRQESSPSQNIHQFQNVDGSQLEALASAALLQAATSDTTALALKELIE------RPESETNTR 1232
            .|..:::|....||:.|::...|::.:........:.||:..| ||..|:      .|.|.::..
pombe  1051 LKSEEDTSLETPIHENQSIQSDQIKEVGEVLSAIKSLSDSVML-LKNQIDDLAKEKLPLSSSDDE 1114

  Fly  1233 SSNIAE 1238
            ..||.|
pombe  1115 KVNIKE 1120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HcfNP_524621.2 PLN02193 <59..363 CDD:177844 76/312 (24%)
KELCH repeat 74..115 CDD:276965 11/45 (24%)
KELCH repeat 123..175 CDD:276965 13/54 (24%)
KELCH repeat 178..239 CDD:276965 17/60 (28%)
KELCH repeat 297..360 CDD:276965 7/62 (11%)
FN3 <1307..>1381 CDD:442628
FN3 <1307..1338 CDD:238020
FN3 1344..1448 CDD:238020
tea1NP_588351.1 KELCH repeat 80..131 CDD:276965 12/50 (24%)
NanM 92..376 CDD:442289 92/420 (22%)
KELCH repeat 134..181 CDD:276965 11/50 (22%)
KELCH repeat 188..239 CDD:276965 16/59 (27%)
KELCH repeat 243..290 CDD:276965 17/52 (33%)
KELCH repeat 293..338 CDD:276965 17/146 (12%)
AF-4 384..>574 CDD:461550 51/215 (24%)
SMC_prok_B <488..1106 CDD:274008 126/741 (17%)
Blue background indicates that the domain is not in the aligned region.

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