DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hcf and LOC1275832

DIOPT Version :10

Sequence 1:NP_524621.2 Gene:Hcf / 43788 FlyBaseID:FBgn0039904 Length:1500 Species:Drosophila melanogaster
Sequence 2:XP_315113.5 Gene:LOC1275832 / 1275832 VectorBaseID:AGAMI1_003318 Length:532 Species:Anopheles gambiae


Alignment Length:453 Identity:101/453 - (22%)
Similarity:162/453 - (35%) Gaps:147/453 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 PQPRPRHGHRAINI--------KELMVVFGG----GNEGIV-DELHVYNTVTNQWYVPVLKGDV- 119
            |.|..|     :|:        :|.:.:.||    |.:.:: .:.:.||...|:|  ..||..: 
Mosquito    64 PPPTAR-----VNVGICAHPADREEIFIHGGEFFNGQQTVIYGDFYSYNVAKNEW--KTLKSSIC 121

  Fly   120 ---PNGCAAYGFVVEGTRMFVFGGMIEYGKYS-------NELYELQATKWEWRKMYPESPDSGLS 174
               .:|........:|.::::|||  ||...|       .:|:..:..|.:|.|:  .:|:   .
Mosquito   122 PAPRSGHQMVPVATDGGQIWLFGG--EYASPSQLQFYHFRDLWVYRMAKKQWEKI--NAPN---G 179

  Fly   175 PCPRLGHSFTMVGEKIFLFGGLANESDDPKNNIP-KYLNDLYILDTRGVHSHNGKWIVPKTYGDS 238
            |..|.||...:..:|:|:|||..:      ||.. :|.||||..   .:.|:.  |...:..|..
Mosquito   180 PSARSGHRMVVTRKKLFVFGGFHD------NNASYRYFNDLYAF---SLESYT--WTKIEGAGPV 233

  Fly   239 PPPRESHTGISFATKSNGNLNLLIYGGMS----------GCRLGDLWLLETD------------- 280
            ||||   :|......::|  .:||:||.|          |....|::.|..|             
Mosquito   234 PPPR---SGCCMVANADG--KILIWGGYSKTSVKKEIDRGTTHTDMFALVPDKQQDGKTGAATAQ 293

  Fly   281 -SMTWSKPKTSGEAPLPRSLHSSTMIGN-KMYVFGGWVPLVINDSKSTTEREWKCTNTLAVLDLE 343
             :..|:..|.:|:.|.|||..:.|:..| |.|.|||    |::..:...:.....:|.|..||..
Mosquito   294 PTYKWTSVKPNGKKPAPRSGMAVTIAPNGKAYTFGG----VMDTEEDEEDVRGMFSNELHALDTG 354

  Fly   344 TMTWENVTLDT---------VEENV---------------------------------------- 359
            ..||..:.|..         |:.|.                                        
Mosquito   355 ACTWRKLELAAKAKKSKLADVQMNEEEKEKQQQQSAKIVSDDGVFTMTVGGSGASGGASKGAAKG 419

  Fly   360 ------------PRARAGHCAVGIQSRLYVWSG--RDGYRKAWNNQVCCKDLWYLEVSKPLYA 408
                        |..|.....|..:.:|||:.|  ..|.|:...:.:...||..|:|.|.|.|
Mosquito   420 EEGDAGALDLGGPSPRMNAAIVVCKGQLYVYGGLYESGSRQFTLSDLYALDLHKLDVWKTLIA 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HcfNP_524621.2 PLN02193 <59..363 CDD:177844 86/404 (21%)
KELCH repeat 74..115 CDD:276965 10/53 (19%)
KELCH repeat 123..175 CDD:276965 12/58 (21%)
KELCH repeat 178..239 CDD:276965 18/61 (30%)
KELCH repeat 297..360 CDD:276965 19/124 (15%)
FN3 <1307..>1381 CDD:442628
FN3 <1307..1338 CDD:238020
FN3 1344..1448 CDD:238020
LOC1275832XP_315113.5 None
Blue background indicates that the domain is not in the aligned region.

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