DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hcf and KLHDC3

DIOPT Version :10

Sequence 1:NP_524621.2 Gene:Hcf / 43788 FlyBaseID:FBgn0039904 Length:1500 Species:Drosophila melanogaster
Sequence 2:NP_476502.1 Gene:KLHDC3 / 116138 HGNCID:20704 Length:382 Species:Homo sapiens


Alignment Length:328 Identity:90/328 - (27%)
Similarity:141/328 - (42%) Gaps:64/328 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FSSGERISASDLNSEHIIQAENHSFANRISMDMDVPDGHQLDSNLTGFRW------KRVLNPTGP 69
            :|.|...|..|.  |.:.|.:.|.|                  |....||      |..:....|
Human    27 YSFGGYCSGEDY--ETLRQIDVHIF------------------NAVSLRWTKLPPVKSAIRGQAP 71

  Fly    70 -QPRPRHGHRAINIKELMVVFGGGN--EGIVDELHVYNTVTNQWYVPVLKGDVPNGCAAYGFVVE 131
             .|..|:||..:.|.:.::::||.|  ||..:.|:.::..|::|:.|.:.|.||.....:...|.
Human    72 VVPYMRYGHSTVLIDDTVLLWGGRNDTEGACNVLYAFDVNTHKWFTPRVSGTVPGARDGHSACVL 136

  Fly   132 GTRMFVFGGMIEYGK-YSNELYELQATKWEWRKMYPESPDSGLSPCP-RLGHSFTMVGEKIFLFG 194
            |..|::|||..:... :||::::|..:...|..:..:.     ||.. |..||.||:|..:::||
Human   137 GKIMYIFGGYEQQADCFSNDIHKLDTSTMTWTLICTKG-----SPARWRDFHSATMLGSHMYVFG 196

  Fly   195 GLANESDDPKNNIPKYLNDLYILDTRGVHSHNGKWIVPKTYGDSPPP------RESHTGISFATK 253
            |.|:......:|...|.|.:.:.|||     ...|:      |.||.      |.||:...:   
Human   197 GRADRFGPFHSNNEIYCNRIRVFDTR-----TEAWL------DCPPTPVLPEGRRSHSAFGY--- 247

  Fly   254 SNGNLNLLIYGGMSGCRLG----DLWLLETDSMTWSKPKTSGEAPLPRSLHSSTMIGNKMYVFGG 314
             ||  .|.|:||.: .||.    |||.....|.||.|.:..|:.|.||......::|:|:.:|||
Human   248 -NG--ELYIFGGYN-ARLNRHFHDLWKFNPVSFTWKKIEPKGKGPCPRRRQCCCIVGDKIVLFGG 308

  Fly   315 WVP 317
            ..|
Human   309 TSP 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HcfNP_524621.2 PLN02193 <59..363 CDD:177844 81/280 (29%)
KELCH repeat 74..115 CDD:276965 13/42 (31%)
KELCH repeat 123..175 CDD:276965 10/52 (19%)
KELCH repeat 178..239 CDD:276965 18/60 (30%)
KELCH repeat 297..360 CDD:276965 7/21 (33%)
FN3 <1307..>1381 CDD:442628
FN3 <1307..1338 CDD:238020
FN3 1344..1448 CDD:238020
KLHDC3NP_476502.1 NanM 14..308 CDD:442289 87/323 (27%)
KELCH repeat 14..62 CDD:276965 11/54 (20%)
Kelch 1 25..77 14/69 (20%)
KELCH repeat 77..122 CDD:276965 13/44 (30%)
Kelch 2 88..138 13/49 (27%)
KELCH repeat 128..173 CDD:276965 10/44 (23%)
Kelch 3 139..189 15/54 (28%)
KELCH repeat 180..236 CDD:276965 20/66 (30%)
Kelch 4 191..249 17/72 (24%)
KELCH repeat 239..283 CDD:276965 18/50 (36%)
Kelch 5 251..301 17/50 (34%)
Blue background indicates that the domain is not in the aligned region.

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