DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hcf and XB5901661

DIOPT Version :10

Sequence 1:NP_524621.2 Gene:Hcf / 43788 FlyBaseID:FBgn0039904 Length:1500 Species:Drosophila melanogaster
Sequence 2:XP_002941787.1 Gene:XB5901661 / 100145144 XenbaseID:XB-GENE-5901662 Length:502 Species:Xenopus tropicalis


Alignment Length:290 Identity:77/290 - (26%)
Similarity:118/290 - (40%) Gaps:78/290 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 EGTRMFVFGGMIEYGKYSNELYELQATKWEWRKMYPESPDSGLSPCPRLGHSFTMVGE--KIFLF 193
            :||||       ::.|  :.:::|...:..|..  .|:...||||..|.||:.|...|  :|::|
 Frog   208 QGTRM-------QFCK--DSMWKLNTDRSTWTP--AEALADGLSPEARTGHTATFDPENNRIYVF 261

  Fly   194 GGLANESDDPKNNIPKYLNDLYILDTRGVHSHNGKWIVPKTYGDSPPPRESHTGISFATKSNGNL 258
            ||..|.         |:.||::|||...     .:|...:..|..||       :|:.|.|....
 Frog   262 GGSKNR---------KWFNDVHILDIEA-----WRWRSVEAQGKVPP-------LSYHTCSLFRG 305

  Fly   259 NLLIYGGM--------SGCRLGDLWLLETDSMTWSKPKTSGEAPLPRSLHSSTMIGNKMYVFGGW 315
            .|.::||:        .||. ..|::.:.....|.:|...|:.|..||.||:.::..::||||||
 Frog   306 ELFVFGGVFPRPNPEPDGCS-NLLYIFDPQHEIWYQPIVLGKTPSSRSGHSACLLNRELYVFGGW 369

  Fly   316 -VPLVINDSKSTTEREWKCTNTLAVLDLETMTWENVTLDTVEENVPRARAGHCAVGIQS-RLYVW 378
             .|:              |.|.|.||||..|.:   :|..|..:.|..|..|.|..:.. :..:.
 Frog   370 DTPV--------------CYNDLYVLDLGLMEF---SLVEVTGSSPSPRCWHSAAPVSDFQFLIH 417

  Fly   379 SGRDGYR------------KAWNNQVCCKD 396
            .|.||.:            |.|.    |.|
 Frog   418 GGYDGNQALSDTYLFNTVTKTWT----CLD 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HcfNP_524621.2 PLN02193 <59..363 CDD:177844 67/242 (28%)
KELCH repeat 74..115 CDD:276965
KELCH repeat 123..175 CDD:276965 10/43 (23%)
KELCH repeat 178..239 CDD:276965 18/62 (29%)
KELCH repeat 297..360 CDD:276965 21/63 (33%)
FN3 <1307..>1381 CDD:442628
FN3 <1307..1338 CDD:238020
FN3 1344..1448 CDD:238020
XB5901661XP_002941787.1 KELCH repeat 189..235 CDD:276965 8/37 (22%)
Kelch_3 200..252 CDD:433188 16/54 (30%)
NanM 227..499 CDD:442289 71/262 (27%)
KELCH repeat 244..295 CDD:276965 20/71 (28%)
KELCH repeat 296..348 CDD:276965 12/52 (23%)
KELCH repeat 401..440 CDD:276965 7/38 (18%)
Blue background indicates that the domain is not in the aligned region.

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