DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PMCA and PMA1

DIOPT Version :9

Sequence 1:NP_001014689.3 Gene:PMCA / 43787 FlyBaseID:FBgn0259214 Length:1255 Species:Drosophila melanogaster
Sequence 2:NP_011507.1 Gene:PMA1 / 852876 SGDID:S000002976 Length:918 Species:Saccharomyces cerevisiae


Alignment Length:1091 Identity:234/1091 - (21%)
Similarity:424/1091 - (38%) Gaps:326/1091 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LRELMEHRG-------REGVMKIAENGGIHELCKKLYTSPNEGLSGSKADEE-HRRETFGSNVIP 74
            :.||..:.|       .:|.:...|...:.|  :.|.|.|:.||:   :||. .||:.:|.|.:.
Yeast    47 IEELQSNHGVDDEDSDNDGPVAAGEARPVPE--EYLQTDPSYGLT---SDEVLKRRKKYGLNQMA 106

  Fly    75 PKPPKTFLTLVWEALQDVTLIILEVAALVSLGLSFYKPADEDAPVLQEEEEHHGWIEGLAILISV 139
            .:.....:..|...:..:. .::|.||:::.|||                   .|::     ..|
Yeast   107 DEKESLVVKFVMFFVGPIQ-FVMEAAAILAAGLS-------------------DWVD-----FGV 146

  Fly   140 IV-VVIVTAFNDYSKERQFRGLQNRIEG--EHKFSVIRGGEVCQISVGDILVGDIAQVKYGDLLP 201
            |. ::::.|...:.:|.|...:.:.::.  .:...|||.|::.:|...:::.|||.|::.|.::|
Yeast   147 ICGLLMLNAGVGFVQEFQAGSIVDELKKTLANTAVVIRDGQLVEIPANEVVPGDILQLEDGTVIP 211

  Fly   202 ADGCLIQSN-DLKVDESSLTGESDHVKKGPDVDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFT 265
            .||.::..: .|::|:|::||||..|.|  .......|.:.|..|.|.|||||.|.|       |
Yeast   212 TDGRIVTEDCFLQIDQSAITGESLAVDK--HYGDQTFSSSTVKRGEGFMVVTATGDN-------T 267

  Fly   266 LLGAAVDEQEAEIKKMKKEAKRANKQKNLTGENDGRSQIKGSQAPSQRETVTSEITKSESEGNHL 330
            .:|.|              |...||                                        
Yeast   268 FVGRA--------------AALVNK---------------------------------------- 278

  Fly   331 PQSSSSGAAETGHKKEKSVLQAKLTKLAIQIGYAGSTIAVLTVIILIIQFCIKTFVIDEKPWKNT 395
                  .|...||          .|::...||          :|:|::  .|.|.::   .|...
Yeast   279 ------AAGGQGH----------FTEVLNGIG----------IILLVL--VIATLLL---VWTAC 312

  Fly   396 Y--ANNLVKHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICS 458
            :  .|.:|:.|...:.:.::.||.|||..||.::|.....:.|...:|:.|.|.|::.....:||
Yeast   313 FYRTNGIVRILRYTLGITIIGVPVGLPAVVTTTMAVGAAYLAKKQAIVQKLSAIESLAGVEILCS 377

  Fly   459 DKTGTLTTNRMTVVQSYICEKLCKVLPTLSDIPQHVGNLITMGISVNSAYTSNIMAGHNPGDLPI 523
            |||||||.|::::.:.|..|                                    |.:|.||.:
Yeast   378 DKTGTLTKNKLSLHEPYTVE------------------------------------GVSPDDLML 406

  Fly   524 QVGNKTECALL------------GFVQGLGVKYQSIRDEITEDKFTRVYTFNSVRKSMGTVIPRP 576
                 |.|...            .|::.| .:|...:|.:|:.|....:.|:.|.|.:..|:..|
Yeast   407 -----TACLAASRKKKGLDAIDKAFLKSL-KQYPKAKDALTKYKVLEFHPFDPVSKKVTAVVESP 465

  Fly   577 NGGYRLYTKGASEIIMKKCAFIYGHEGTLEK---FTRDMQERLIREVIEPMACDGLRTISVAYRD 638
            .|...:..|||...::|          |:|:   ...|:.|....:|.| :|..|.|.:.||.: 
Yeast   466 EGERIVCVKGAPLFVLK----------TVEEDHPIPEDVHENYENKVAE-LASRGFRALGVARK- 518

  Fly   639 FVPGKAAINEVHIDGEPNWDDEENIMTNLTCLCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGD 703
                         .||.:|:    |:..:.|:      ||.|.:....:.:.:..|:.|:|:|||
Yeast   519 -------------RGEGHWE----ILGVMPCM------DPPRDDTAQTVSEARHLGLRVKMLTGD 560

  Fly   704 NINTARSIASKCGI-----------LRPNDDFLILEGKEFNRRIRDSNGDIQQHLIDKVWPKLRV 757
            .:..|:....:.|:           |....|   :.|.|....:.:::|                
Yeast   561 AVGIAKETCRQLGLGTNIYNAERLGLGGGGD---MPGSELADFVENADG---------------- 606

  Fly   758 LARSSPTDKYTLVKGIIDSTVSENR-EVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDI 821
            .|...|..||.:|:      :.:|| .:||:||||.||.|:|||||.|.|:. ..||.|:.|:||
Yeast   607 FAEVFPQHKYRVVE------ILQNRGYLVAMTGDGVNDAPSLKKADTGIAVE-GATDAARSAADI 664

  Fly   822 ILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGA-CAVQDSPLKAVQMLWVNL 885
            :......|:|:.|:...|.::..:..::.:::.:::...|  |:|. .|:.|:.|....::::.:
Yeast   665 VFLAPGLSAIIDALKTSRQIFHRMYSYVVYRIALSLHLEI--FLGLWIAILDNSLDIDLIVFIAI 727

  Fly   886 IMDTLASLALATEFPTPDLLLRKPYGRTKPL---ISRTMMKNILGQALYQLIIIFGLLFV----- 942
            ..| :|:||:|.:        ..||. .||:   :.|          |:.:.||.|::..     
Yeast   728 FAD-VATLAIAYD--------NAPYS-PKPVKWNLPR----------LWGMSIILGIVLAIGSWI 772

  Fly   943 ---------GDVILDIESGRG-QELNAGPTQHFTIIFNTFVMMTLFNEINARKIHGQRNVIEGLL 997
                     |.:|.:..:..| ..|....|::: :||.|......::.|.:.::.|....::.:.
Yeast   773 TLTTMFLPKGGIIQNFGAMNGIMFLQISLTENW-LIFITRAAGPFWSSIPSWQLAGAVFAVDIIA 836

  Fly   998 TNPIFYTIWIFTMISQVLIIQYGKMAFSTKALTLDQWLWCIFFGIGTLVWG 1048
            |....:..|.......|.:::.              |:|.|  ||..::.|
Yeast   837 TMFTLFGWWSENWTDIVTVVRV--------------WIWSI--GIFCVLGG 871

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMCANP_001014689.3 ATPase-IIB_Ca 1..1057 CDD:273668 234/1091 (21%)
Cation_ATPase_N 36..104 CDD:279080 16/68 (24%)
E1-E2_ATPase 172..448 CDD:278548 65/278 (23%)
Cation_ATPase 505..598 CDD:289987 22/104 (21%)
HAD_like 676..807 CDD:119389 38/142 (27%)
Cation_ATPase_C 873..1051 CDD:279079 34/194 (18%)
ATP_Ca_trans_C 1096..1142 CDD:289209
PMA1NP_011507.1 P-type_ATPase_H 87..874 CDD:319771 225/1049 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341396
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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