DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PMCA and CCC2

DIOPT Version :10

Sequence 1:NP_001014689.3 Gene:PMCA / 43787 FlyBaseID:FBgn0259214 Length:1255 Species:Drosophila melanogaster
Sequence 2:NP_010556.1 Gene:CCC2 / 851862 SGDID:S000002678 Length:1004 Species:Saccharomyces cerevisiae


Alignment Length:1142 Identity:226/1142 - (19%)
Similarity:353/1142 - (30%) Gaps:471/1142 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 ISLKQLRELMEHRG----------------REGVMKIAENGGIHELCKKLYTSPNEGLSG----- 56
            ::...::|::|..|                :||::.:  .|.....|....|...||:.|     
Yeast    50 VTADSIKEIIEDCGFDCEILRDSEITAISTKEGLLSV--QGMTCGSCVSTVTKQVEGIEGVESVV 112

  Fly    57 --------------SKADEEHRRET-----FGSNVI------PPKPPKTFLTLVWEALQDVTLII 96
                          ||...|..||.     |.||:|      .....||.:..|.:|.:|.:.:|
Yeast   113 VSLVTEECHVIYEPSKTTLETAREMIEDCGFDSNIIMDGNGNADMTEKTVILKVTKAFEDESPLI 177

  Fly    97 LEVAA-----LVSLGLSFYKPADE---------------------------------------DA 117
            |...:     |:.||:...:.:|:                                       ..
Yeast   178 LSSVSERFQFLLDLGVKSIEISDDMHTLTIKYCCNELGIRDLLRHLERTGYKFTVFSNLDNTTQL 242

  Fly   118 PVLQEEEEHHGWIEG------LAILISVIVVVIVTAFNDYSKERQF--------RGLQNR----- 163
            .:|.:|:|...|.:.      |||:..::.:::...:....::|.|        |||..|     
Yeast   243 RLLSKEDEIRFWKKNSIKSTLLAIICMLLYMIVPMMWPTIVQDRIFPYKETSFVRGLFYRDILGV 307

  Fly   164 -IEGEHKFSV-----------IRGGE------VC------------------------------- 179
             :....:|||           ::.|.      ||                               
Yeast   308 ILASYIQFSVGFYFYKAAWASLKHGSGTMDTLVCVSTTCAYTFSVFSLVHNMFHPSSTGKLPRIV 372

  Fly   180 ---------QISVGDIL-------------------------------------------VGDIA 192
                     .||:|..|                                           |.||.
Yeast   373 FDTSIMIISYISIGKYLETLAKSQTSTALSKLIQLTPSVCSIISDVERNETKEIPIELLQVNDIV 437

  Fly   193 QVKYGDLLPADGCLIQSNDLKVDESSLTGESDHVKKGPDVDPMVLSGTHVMEGSGKMVVTAVGVN 257
            ::|.|..:|||| :|...:.::|||.:||||..|.|        .:|..|:.||         ||
Yeast   438 EIKPGMKIPADG-IITRGESEIDESLMTGESILVPK--------KTGFPVIAGS---------VN 484

  Fly   258 SQAGIIFTLLGAAVDEQEAEIKKMKKEAKRANKQKNLTGENDGRSQIKGSQAPSQRETVTSEITK 322
            ......|.......:.:.|.|.|:.||                                      
Yeast   485 GPGHFYFRTTTVGEETKLANIIKVMKE-------------------------------------- 511

  Fly   323 SESEGNHLPQSSSSGAAETGHKKEKSVLQAKLTKLAIQIGYAG--STIAVLTVIIL-IIQFCIKT 384
                                         |:|:|..|| |||.  ::|.|..::|| ::.|.|..
Yeast   512 -----------------------------AQLSKAPIQ-GYADYLASIFVPGILILAVLTFFIWC 546

  Fly   385 FV--IDEKP----WKNTYANNLVKHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRH 443
            |:  |...|    ..||.|:|....|....:|::||.|..|.||...::........::..|::.
Yeast   547 FILNISANPPVAFTANTKADNFFICLQTATSVVIVACPCALGLATPTAIMVGTGVGAQNGVLIKG 611

  Fly   444 LDACETMGNATAICSDKTGTLTTNRMTVVQSYICEKLCKVLPTLSDIPQHVGNLITMGISVNSAY 508
            .:..|...:.|....||||||||..|.|      :|..|                          
Yeast   612 GEVLEKFNSITTFVFDKTGTLTTGFMVV------KKFLK-------------------------- 644

  Fly   509 TSNIMAGHNPGDLPIQVGNKTECALLGFVQGLGVKYQSIRDEITEDKFTRVYTFNSVRKSMGTVI 573
            .||            .|||..|..:|..::..    :||.|........|.....:..|::..|:
Yeast   645 DSN------------WVGNVDEDEVLACIKAT----ESISDHPVSKAIIRYCDGLNCNKALNAVV 693

  Fly   574 PRPNGGYRLYTKGASEIIMKKCAFIYGHEGTLEKFTRDM---QERLIREVIEPMACDGLRTISVA 635
            ....     |..|..  |:.||. :.|:       |.|:   .|.||.|       |.|:.....
Yeast   694 LESE-----YVLGKG--IVSKCQ-VNGN-------TYDICIGNEALILE-------DALKKSGFI 736

  Fly   636 YRDFVPGKAAINEVHIDGEPNWDDEENIMTNLTCLCVVG---IEDPVRPEVPDAIRKCQRAGITV 697
            ..:...|. .::.|.::|.                 |.|   |.|.|:.:....::..||.|...
Yeast   737 NSNVDQGN-TVSYVSVNGH-----------------VFGLFEINDEVKHDSYATVQYLQRNGYET 783

  Fly   698 RMVTGDNINTARSIASKCGILRPNDDFLILEGKEFNRRIRDSNGDIQQHLIDKVWPKLRVLARSS 762
            .|:||||.:.|:.:|.:.||...|                                   |.:..|
Yeast   784 YMITGDNNSAAKRVAREVGISFEN-----------------------------------VYSDVS 813

  Fly   763 PTDKYTLVKGIIDSTVSENREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDII----- 822
            ||.|..|||.|.|   .|....|||.|||.||.|||..:|:|.|:. .||::|.||:||:     
Yeast   814 PTGKCDLVKKIQD---KEGNNKVAVVGDGINDAPALALSDLGIAIS-TGTEIAIEAADIVILCGN 874

  Fly   823 -LTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLI 886
             |..::...:..|:......:..|...|.:.|..|:..:.:|.            .|.:.|...:
Yeast   875 DLNTNSLRGLANAIDISLKTFKRIKLNLFWALCYNIFMIPIAM------------GVLIPWGITL 927

  Fly   887 MDTLASLALATEFPTPDLLLRKPYGRTKPLISRTMMK 923
            ...||.||:|             :.....::|..|:|
Yeast   928 PPMLAGLAMA-------------FSSVSVVLSSLMLK 951

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMCANP_001014689.3 P-type_ATPase_Ca_PMCA-like 62..921 CDD:319776 211/1054 (20%)
Cation_ATPase_C 873..1051 CDD:376368 10/51 (20%)
ATP_Ca_trans_C 1096..1141 CDD:463575
CCC2NP_010556.1 HMA 6..67 CDD:238219 3/16 (19%)
HMA 84..144 CDD:238219 11/61 (18%)
P-type_ATPase_Cu-like 259..938 CDD:319783 188/916 (21%)
Blue background indicates that the domain is not in the aligned region.

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