DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PMCA and ACA1

DIOPT Version :10

Sequence 1:NP_001014689.3 Gene:PMCA / 43787 FlyBaseID:FBgn0259214 Length:1255 Species:Drosophila melanogaster
Sequence 2:NP_849716.1 Gene:ACA1 / 839670 AraportID:AT1G27770 Length:1020 Species:Arabidopsis thaliana


Alignment Length:1070 Identity:417/1070 - (38%)
Similarity:578/1070 - (54%) Gaps:194/1070 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RPAQYGISLKQLRELMEHRGREGVMKIAENGGIHELCKKLYTSPNEGLSGSKADEEHRRETFGSN 71
            |.|.:.|...:|..::|  |.: :.|:..:||...|.:||.||...|:|.|:.....|:|.:|.|
plant    92 RKAGFEICPDELGSIVE--GHD-LKKLKIHGGTEGLTEKLSTSIASGISTSEDLLSVRKEIYGIN 153

  Fly    72 VIPPKPPKTFLTLVWEALQDVTLIILEVAALVSLGLSFYKPADEDAPVLQEEEEHHGW----IEG 132
            .....|.:.|...|||||||.||:||...|.|||.:.          :|.|     ||    .:|
plant   154 QFTESPSRGFWLFVWEALQDTTLMILAACAFVSLIVG----------ILME-----GWPIGAHDG 203

  Fly   133 LAILISVIVVVIVTAFNDYSKERQFRGLQNRIEGEHK---FSVIRGGEVCQISVGDILVGDIAQV 194
            |.|:.|:::||.|||.:||.:..||:.|    :.|.|   ..|.|.....:||:.|:|.||:..:
plant   204 LGIVASILLVVFVTATSDYRQSLQFKDL----DAEKKKIVVQVTRDKLRQKISIYDLLPGDVVHL 264

  Fly   195 KYGDLLPADGCLIQSNDLKVDESSLTGESDHVKKGPDVDPMVLSGTHVMEGSGKMVVTAVGVNSQ 259
            ..||.:||||..|....:.::||||||||:.|....: .|.:||||.|.:||.||:||.||:.:|
plant   265 GIGDQIPADGLFISGFSVLINESSLTGESEPVSVSVE-HPFLLSGTKVQDGSCKMLVTTVGMRTQ 328

  Fly   260 AGIIFTLLGAAVDEQEAEIKKMKKEAKRANKQKNLTGENDGRSQIKGSQAPSQRETVTSEITKSE 324
            .|.:...|                                                         
plant   329 WGKLMATL--------------------------------------------------------- 336

  Fly   325 SEGNHLPQSSSSGAAETGHKKEKSVLQAKLTKLAIQIGYAGSTIAVLTVIILIIQFCIKTFVIDE 389
            |||.                .:::.||.||..:|..||..|...||:|..:| :|.......:|.
plant   337 SEGG----------------DDETPLQVKLNGVATIIGKIGLFFAVITFAVL-VQGLANQKRLDN 384

  Fly   390 KPWKNTYANNL---VKHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMG 451
            ..|..| |:.|   :::..:.||::|||||||||||||||||:::||||.|..|||:|.||||||
plant   385 SHWIWT-ADELMAMLEYFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRNLAACETMG 448

  Fly   452 NATAICSDKTGTLTTNRMTVVQSYICEKLCKV------LPTLSDIPQHVGNLITMGISVNSAYTS 510
            :||.||||||||||||.||||::.|||:..:|      :...|.||:....|:...|..|:.   
plant   449 SATTICSDKTGTLTTNHMTVVKACICEQAKEVNGPDAAMKFASGIPESAVKLLLQSIFTNTG--- 510

  Fly   511 NIMAGHNPGDLPIQVGNK-------TECALLGFVQGLGVKYQSIRDEITEDKFTRVYTFNSVRKS 568
                    |::.:..|||       ||.|||.|...||..:|.:|.   .....:|..|||.:|.
plant   511 --------GEIVVGKGNKTEILGTPTETALLEFGLSLGGDFQEVRQ---ASNVVKVEPFNSTKKR 564

  Fly   569 MGTVIPRPNGGYRLYTKGASEIIMKKCAFIYGHEGTL----EKFTRDMQERLIREVIEPMACDGL 629
            ||.||..|...:|.:.||||||::..|......:|.:    ||.|..     ::.:||..|.:.|
plant   565 MGVVIELPERHFRAHCKGASEIVLDSCDKYINKDGEVVPLDEKSTSH-----LKNIIEEFASEAL 624

  Fly   630 RTISVAYRDFVPGKAAINEVHIDGEPNWDDEENIMTNL-----TCLCVVGIEDPVRPEVPDAIRK 689
            ||:.:||.:.                  .||.::...:     ||:.:|||:|||||.|.:::..
plant   625 RTLCLAYFEI------------------GDEFSLEAPIPSGGYTCIGIVGIKDPVRPGVKESVAI 671

  Fly   690 CQRAGITVRMVTGDNINTARSIASKCGILRPNDDFLILEGKEFNRRIRDSNGDIQQHLIDKVWPK 754
            |:.||||||||||||:.||::||.:||||  .||.:.:||.||..:       ..:.|: |:.||
plant   672 CKSAGITVRMVTGDNLTTAKAIARECGIL--TDDGIAIEGPEFREK-------SDEELL-KLIPK 726

  Fly   755 LRVLARSSPTDKYTLVKGIIDSTVSENREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEAS 819
            |:|:|||||.||:|||:  :..|:.:  ||||||||||||.|||.:||:|.||||:||:||||::
plant   727 LQVMARSSPMDKHTLVR--LLRTMFQ--EVVAVTGDGTNDAPALHEADIGLAMGISGTEVAKESA 787

  Fly   820 DIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVN 884
            |:|:.|||||:||....|||:||.:|.||:||||||||||:||.|:.||...::||.|||:||||
plant   788 DVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFLSACLTGNAPLTAVQLLWVN 852

  Fly   885 LIMDTLASLALATEFPTPDLLLRKPYGRTKPLISRTMMKNILGQALYQLIIIFGLLFVGDVILDI 949
            :|||||.:||||||.|..||:.|.|.||....||..|.:|||||:||||:||:.|...|..:..:
plant   853 MIMDTLGALALATEPPQDDLMKRSPVGRKGNFISNVMWRNILGQSLYQLVIIWCLQTKGKTMFGL 917

  Fly   950 ESGRGQELNAGPTQHF---TIIFNTFVMMTLFNEINARKIHGQRNVIEGLLTNPIFYTIWIFTMI 1011
            :         ||....   |:|||.||...:||||::|::. :.:|.:|:|.|.:|..:...|::
plant   918 D---------GPDSDLTLNTLIFNIFVFCQVFNEISSREME-KIDVFKGILKNYVFVAVLTCTVV 972

  Fly  1012 SQVLIIQYGKMAFSTKALTLDQWLWCIFFG 1041
            .||:||:.......|..|.|.|||..|..|
plant   973 FQVIIIELLGTFADTTPLNLGQWLVSIILG 1002

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMCANP_001014689.3 P-type_ATPase_Ca_PMCA-like 62..921 CDD:319776 355/890 (40%)
Cation_ATPase_C 873..1051 CDD:376368 74/172 (43%)
ATP_Ca_trans_C 1096..1141 CDD:463575
ACA1NP_849716.1 CaATP_NAI 5..50 CDD:432606
ATPase-IIB_Ca 59..1017 CDD:273668 417/1070 (39%)
Blue background indicates that the domain is not in the aligned region.

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