DRSC/TRiP Functional Genomics Resources

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Protein Alignment PMCA and atp2b4

DIOPT Version :9

Sequence 1:NP_001014689.3 Gene:PMCA / 43787 FlyBaseID:FBgn0259214 Length:1255 Species:Drosophila melanogaster
Sequence 2:NP_001070935.1 Gene:atp2b4 / 768304 ZFINID:ZDB-GENE-061027-60 Length:316 Species:Danio rerio


Alignment Length:306 Identity:192/306 - (62%)
Similarity:225/306 - (73%) Gaps:25/306 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MATIDGRPAQYGISLKQLRELMEHRGREGVMKIAE-NGGIHELCKKLYTSPNEGLSGSKADEEHR 64
            :|.:| ....:|.::.|||||||.|..|.|.|||| .|.:..:|::|.|||.|||||:.||.|.|
Zfish    14 VAEVD-HEGDFGCTMMQLRELMELRSGEAVSKIAECYGDVQGICRRLKTSPIEGLSGNPADIEKR 77

  Fly    65 RETFGSNVIPPKPPKTFLTLVWEALQDVTLIILEVAALVSLGLSFYKPADED-------APVLQE 122
            ..:||.|.||||.|||||.||||||||||||||||||::||.||||.|.:.|       ..|..|
Zfish    78 HTSFGKNFIPPKKPKTFLQLVWEALQDVTLIILEVAAIISLALSFYHPPEGDNAACGEVGGVEDE 142

  Fly   123 EEEHHGWIEGLAILISVIVVVIVTAFNDYSKERQFRGLQNRIEGEHKFSVIRGGEVCQISVGDIL 187
            .|...|||||.|||.|||:||:||||||:|||:||||||:|||.|.||:|||.|:|.||.|.:|:
Zfish   143 GESQAGWIEGAAILFSVIIVVLVTAFNDWSKEKQFRGLQSRIEQEQKFTVIRKGQVIQIPVAEIV 207

  Fly   188 VGDIAQVKYGDLLPADGCLIQSNDLKVDESSLTGESDHVKKGPDVDPMVLSGTHVMEGSGKMVVT 252
            ||||||:||||||||||.|||.||||:||||||||||.|:|..:.|||:|||||||||||:|||:
Zfish   208 VGDIAQIKYGDLLPADGILIQGNDLKIDESSLTGESDQVRKSLEKDPMLLSGTHVMEGSGRMVVS 272

  Fly   253 AVGVNSQAGIIFTLLGAAVDEQEAEIKKMKKEAKRANKQKNLTGEN 298
            |||:|||.|||||||||..||:    ||:||            |||
Zfish   273 AVGLNSQTGIIFTLLGAGEDEE----KKVKK------------GEN 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMCANP_001014689.3 ATPase-IIB_Ca 1..1057 CDD:273668 192/306 (63%)
Cation_ATPase_N 36..104 CDD:279080 45/67 (67%)
E1-E2_ATPase 172..448 CDD:278548 85/127 (67%)
Cation_ATPase 505..598 CDD:289987
HAD_like 676..807 CDD:119389
Cation_ATPase_C 873..1051 CDD:279079
ATP_Ca_trans_C 1096..1142 CDD:289209
atp2b4NP_001070935.1 Cation_ATPase_N 47..117 CDD:279080 46/69 (67%)
E1-E2_ATPase 153..>287 CDD:278548 101/133 (76%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594103
Domainoid 1 1.000 257 1.000 Domainoid score I1973
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1385 1.000 Inparanoid score I123
OMA 1 1.010 - - QHG53587
OrthoDB 1 1.010 - - D115892at2759
OrthoFinder 1 1.000 - - FOG0000362
OrthoInspector 1 1.000 - - otm25312
orthoMCL 1 0.900 - - OOG6_100143
Panther 1 1.100 - - O PTHR24093
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X220
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.910

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