DRSC/TRiP Functional Genomics Resources

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Protein Alignment PMCA and atp2b4

DIOPT Version :10

Sequence 1:NP_001014689.3 Gene:PMCA / 43787 FlyBaseID:FBgn0259214 Length:1255 Species:Drosophila melanogaster
Sequence 2:NP_001070935.1 Gene:atp2b4 / 768304 ZFINID:ZDB-GENE-061027-60 Length:316 Species:Danio rerio


Alignment Length:306 Identity:192/306 - (62%)
Similarity:225/306 - (73%) Gaps:25/306 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MATIDGRPAQYGISLKQLRELMEHRGREGVMKIAE-NGGIHELCKKLYTSPNEGLSGSKADEEHR 64
            :|.:| ....:|.::.|||||||.|..|.|.|||| .|.:..:|::|.|||.|||||:.||.|.|
Zfish    14 VAEVD-HEGDFGCTMMQLRELMELRSGEAVSKIAECYGDVQGICRRLKTSPIEGLSGNPADIEKR 77

  Fly    65 RETFGSNVIPPKPPKTFLTLVWEALQDVTLIILEVAALVSLGLSFYKPADED-------APVLQE 122
            ..:||.|.||||.|||||.||||||||||||||||||::||.||||.|.:.|       ..|..|
Zfish    78 HTSFGKNFIPPKKPKTFLQLVWEALQDVTLIILEVAAIISLALSFYHPPEGDNAACGEVGGVEDE 142

  Fly   123 EEEHHGWIEGLAILISVIVVVIVTAFNDYSKERQFRGLQNRIEGEHKFSVIRGGEVCQISVGDIL 187
            .|...|||||.|||.|||:||:||||||:|||:||||||:|||.|.||:|||.|:|.||.|.:|:
Zfish   143 GESQAGWIEGAAILFSVIIVVLVTAFNDWSKEKQFRGLQSRIEQEQKFTVIRKGQVIQIPVAEIV 207

  Fly   188 VGDIAQVKYGDLLPADGCLIQSNDLKVDESSLTGESDHVKKGPDVDPMVLSGTHVMEGSGKMVVT 252
            ||||||:||||||||||.|||.||||:||||||||||.|:|..:.|||:|||||||||||:|||:
Zfish   208 VGDIAQIKYGDLLPADGILIQGNDLKIDESSLTGESDQVRKSLEKDPMLLSGTHVMEGSGRMVVS 272

  Fly   253 AVGVNSQAGIIFTLLGAAVDEQEAEIKKMKKEAKRANKQKNLTGEN 298
            |||:|||.|||||||||..||:    ||:||            |||
Zfish   273 AVGLNSQTGIIFTLLGAGEDEE----KKVKK------------GEN 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMCANP_001014689.3 P-type_ATPase_Ca_PMCA-like 62..921 CDD:319776 162/244 (66%)
Cation_ATPase_C 873..1051 CDD:376368
ATP_Ca_trans_C 1096..1141 CDD:463575
atp2b4NP_001070935.1 Haloacid Dehalogenase-like Hydrolases 74..>294 CDD:473868 154/219 (70%)
Blue background indicates that the domain is not in the aligned region.

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