DRSC/TRiP Functional Genomics Resources

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Protein Alignment PMCA and JYalpha

DIOPT Version :10

Sequence 1:NP_001014689.3 Gene:PMCA / 43787 FlyBaseID:FBgn0259214 Length:1255 Species:Drosophila melanogaster
Sequence 2:NP_001104092.2 Gene:JYalpha / 5740846 FlyBaseID:FBgn0267363 Length:1009 Species:Drosophila melanogaster


Alignment Length:1137 Identity:296/1137 - (26%)
Similarity:475/1137 - (41%) Gaps:316/1137 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 IHELCKKLYTSPNEGLSGSKADEEHRRETFGSNVIPPKPP--------KT----FLTLVWEALQD 91
            :.||.::|.|.||.|||..:|  :.|.|..|.|::.|:||        ||    |..|:|..   
  Fly    37 VDELLERLKTDPNMGLSFVEA--KLRLEINGPNILTPQPPTPKWIVFLKTMFGGFAILLWAG--- 96

  Fly    92 VTLIILEVAALVSLGLSFYKPADEDAPVLQEEEEHHGWIEGLAILISVIVVVIVTAFNDYSKERQ 156
              ..:..|..|:.|... ::|.|::..:            |:|:.:.|||..:.|.|..:.....
  Fly    97 --SFLCFVGYLIQLQTQ-HEPPDDNLYL------------GIALTVLVIVTGLFTYFQVHKSSSI 146

  Fly   157 FRGLQNRIEGEHKFSVIRGGEVCQISVGDILVGDIAQVKYGDLLPADGCLIQSNDLKVDESSLTG 221
            ....:|.:  ....:|||.||:..::..:|:.|||.:||:||.:|||..:::::.||||.|||||
  Fly   147 MDSFKNLV--PQYATVIREGEINTVTSDEIVKGDIVEVKFGDRVPADIRILEAHGLKVDNSSLTG 209

  Fly   222 ES-------DHVKKGP-DVDPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGAAVDEQEAEI 278
            ||       :...:.| :...:....|:|:||:.:.||.|.|.::..|.|.. |.|.:|:     
  Fly   210 ESEPQVRSTEFTHENPLETKNLAFFSTNVLEGTCRGVVIATGDSTVMGRIAN-LAAGLDD----- 268

  Fly   279 KKMKKEAKRANKQKNLTGENDGRSQIKGSQAPSQRETVTSEITKSESEGNHLPQSSSSGAAETGH 343
                                        .|:|..||                             
  Fly   269 ----------------------------VQSPISRE----------------------------- 276

  Fly   344 KKEKSVLQAKLTKLAIQIGYAGSTIAVLTVIILIIQFCIKTFVIDEKPWKNTYANNLVKHLIIGV 408
                       .:|.|:.      |.:..:|:.:..|.|..          |.....:..::..:
  Fly   277 -----------IQLFIRF------ITIFAIILGLSFFAISL----------TLGYEFIDAVVFLI 314

  Fly   409 TVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTV-- 471
            .::|..|||||.:.||:.|..:.|:|...|.||::|:|.||:|:.:.||||||||||.|||||  
  Fly   315 GIIVANVPEGLLVTVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAH 379

  Fly   472 -------VQS---------------------YICEKLCKVLPTLSDIPQHVGNLITMGISVNSAY 508
                   |:|                     ::|..||                       ||| 
  Fly   380 LWYDQIIVESDTTESFRGSHFKIEDKSFNALFMCAALC-----------------------NSA- 420

  Fly   509 TSNIMAGHNPGDLPI----QVGNKTECALLGFVQ----GLG------VKYQSIRDEITEDKFTRV 559
              ....|.:  |:|:    ..||.:|.|||.|.:    |:|      :|...|....||.....|
  Fly   421 --EFKGGQD--DIPVFKKDVNGNASEAALLKFTETIFAGIGAFRQKHIKLTEIPFNSTEKYQVSV 481

  Fly   560 YTFNSVRKSMGTVIPRPNGGYRLYTKGASEIIMKKCAFIYGHEGTLEKFTRDMQERLIREVIEPM 624
            :.|||           .:|.:.:..|||.|.|:.:|:.|. .:|...:.|..::.......:| |
  Fly   482 HEFNS-----------SDGYFIVEMKGAPERILDRCSTII-IQGLSVELTPTLKLEFEEAYLE-M 533

  Fly   625 ACDGLRTISVAYRDFVPGKAAINEVHIDGEPNWDDEENIMTNLTCLCVVGIEDPVRPEVPDAIRK 689
            ...|.|.:..|.......|..|:.......||:.     :.||..|.::.:.||.|..||||:.|
  Fly   534 GGMGERVLGFADLLLPMSKYPISYEFSADPPNFP-----LENLRFLGLISLIDPPRAAVPDAVAK 593

  Fly   690 CQRAGITVRMVTGDNINTARSIASKCGIL-RPN-DDF------------------LILEGKEFNR 734
            |:.||:.|.|||||:..||::||...||: .|. :|.                  :::.|.|. |
  Fly   594 CRSAGVRVIMVTGDHPITAKAIARSVGIITTPTAEDIAKQRGVTVLDIDSRQATAIVVHGGEL-R 657

  Fly   735 RIRDSNGDIQQHLIDKVWPKLRVLARSSPTDKYTLVKGIIDSTVSENREVVAVTGDGTNDGPALK 799
            .::....|...:..:::     |.||:||..|..:|:     ......|:|||||||.||.||||
  Fly   658 EMKAEELDAVIYYHNEI-----VFARTSPQQKLIIVE-----ACQRRGEIVAVTGDGVNDSPALK 712

  Fly   800 KADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVI--V 862
            :||:|.||||:|:||:|:|:|:||.||||:|||..:..||.::|::.|.:.:.||.|:..::  :
  Fly   713 RADIGVAMGISGSDVSKQAADMILLDDNFASIVVGIEEGRIIFDNLKKSIAYTLTSNLPEIVPFL 777

  Fly   863 AFIGACAVQDSPLK--AVQMLWVNLIMDTLASLALATEFPTPDLLLRKPYGRTKPLISRTMMKNI 925
            .|:    :.|.||.  .:.:|.:::..|.|.:::||.|....|::.|.|   ..|...|.:.|.:
  Fly   778 FFV----IFDIPLALGTIAILCIDIGTDMLPAISLAYEKAESDIMARMP---RDPFEDRLVNKKL 835

  Fly   926 LGQALYQLIII---------FGLL----------------FVGDVILDIESGRGQ---------- 955
            :..|..|:.:|         |.::                :....:.|:|.|.||          
  Fly   836 ILMAYLQIGVIQTVACFFTFFAIMAEHGFPPSRLKGIREDWDSKNVEDLEDGYGQEWTYRERKVL 900

  Fly   956 ELNAGPTQHF-----TIIFNTFVMMTLFNEINARKIHGQRNVIEGLLTNPIFYTIWIFTMISQVL 1015
            |..|| |..|     |.:|:..:..|..|.|.      |:.:...:|...:.....|..::..|.
  Fly   901 EYTAG-TGFFVSIVVTQVFDLLICKTRRNSIL------QQGMGNHVLNFALVLEFIIACLLCYVP 958

  Fly  1016 IIQYGKMAFSTKALTLDQWLWCIFFGIGTLVW 1047
            :.:.....:|.|.:    | |...|..|.|::
  Fly   959 VFEKTLRMYSIKFI----W-WIYAFPFGLLIF 985

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMCANP_001014689.3 P-type_ATPase_Ca_PMCA-like 62..921 CDD:319776 255/946 (27%)
Cation_ATPase_C 873..1051 CDD:376368 44/217 (20%)
ATP_Ca_trans_C 1096..1141 CDD:463575
JYalphaNP_001104092.2 P-type_ATPase_Na-K_like 51..1006 CDD:319794 290/1123 (26%)
Blue background indicates that the domain is not in the aligned region.

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