DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PMCA and ATP1A3

DIOPT Version :9

Sequence 1:NP_001014689.3 Gene:PMCA / 43787 FlyBaseID:FBgn0259214 Length:1255 Species:Drosophila melanogaster
Sequence 2:NP_001243143.1 Gene:ATP1A3 / 478 HGNCID:801 Length:1026 Species:Homo sapiens


Alignment Length:1135 Identity:303/1135 - (26%)
Similarity:476/1135 - (41%) Gaps:287/1135 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LKQLRELMEHRGREGVMKIAENGGIHELCKKLYTSPNEGLSGSKADEEHRRETFGSNVIPPKPPK 79
            ||:...:.||:           ..:.|:|:|..|...:||:.|||.|...|:  |.|.:.| ||.
Human    38 LKKEVAMTEHK-----------MSVEEVCRKYNTDCVQGLTHSKAQEILARD--GPNALTP-PPT 88

  Fly    80 T-------------FLTLVWEALQDVTLIILEVAALVSLGLSFYKPADEDAPVLQEEEEHHGWIE 131
            |             |..|:|         |..:...::.|:   :...||.|        .|  :
Human    89 TPEWVKFCRQLFGGFSILLW---------IGAILCFLAYGI---QAGTEDDP--------SG--D 131

  Fly   132 GLAILISVIVVVIVTAFNDYSKERQ----FRGLQNRIEGEHKFSVIRGGEVCQISVGDILVGDIA 192
            .|.:.|.:..|||:|....|.:|.:    ....:|.:  ..:..|||.||..|::..:::|||:.
Human   132 NLYLGIVLAAVVIITGCFSYYQEAKSSKIMESFKNMV--PQQALVIREGEKMQVNAEEVVVGDLV 194

  Fly   193 QVKYGDLLPADGCLIQSNDLKVDESSLTGESDHVKKGPDV---DPM-----VLSGTHVMEGSGKM 249
            ::|.||.:|||..:|.::..|||.|||||||:...:.||.   :|:     ....|:.:||:.:.
Human   195 EIKGGDRVPADLRIISAHGCKVDNSSLTGESEPQTRSPDCTHDNPLETRNITFFSTNCVEGTARG 259

  Fly   250 VVTAVGVNSQAGIIFTLLGAAVDEQEAEIKKMKKEAKRANKQKNLTGENDGRSQIKGSQAPSQRE 314
            ||.|.|..:..|.|.||                                                
Human   260 VVVATGDRTVMGRIATL------------------------------------------------ 276

  Fly   315 TVTSEITKSESEGNHLPQSSSSGAAETGHKKEKSVLQAKLTKLAIQIGYAGSTIAVLT--VIILI 377
                                :||            |:...|.:||:|.:   .|.::|  .:.|.
Human   277 --------------------ASG------------LEVGKTPIAIEIEH---FIQLITGVAVFLG 306

  Fly   378 IQFCIKTFVIDEKPWKNTYANNLVKHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVR 442
            :.|.|.:.::. ..|        ::.:|..:.::|..|||||...||:.|..:.|:|.:.|.||:
Human   307 VSFFILSLILG-YTW--------LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVK 362

  Fly   443 HLDACETMGNATAICSDKTGTLTTNRMTVVQSYICEKLCKVLPTLSDIPQHVGNLITMGISVNSA 507
            :|:|.||:|:.:.||||||||||.|||||...:...::.:. .|..|         ..|.|.:.:
Human   363 NLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEA-DTTED---------QSGTSFDKS 417

  Fly   508 YTSNIMAGHNPG------------DLPI----QVGNKTECALLGFVQGLGVKYQSIRDEITEDKF 556
            ..:.:...|..|            ::|:    ..|:.:|.|||..::......:.:|:   .:|.
Human   418 SHTWVALSHIAGLCNRAVFKGGQDNIPVLKRDVAGDASESALLKCIELSSGSVKLMRE---RNKK 479

  Fly   557 TRVYTFNSVRKSMGTV--IPRPNGG-YRLYTKGASEIIMKKCA--FIYGHEGTLEKFTRDMQERL 616
            .....|||..|...::  ...||.. |.|..|||.|.|:.:|:  .:.|.|..|::   :|:|..
Human   480 VAEIPFNSTNKYQLSIHETEDPNDNRYLLVMKGAPERILDRCSTILLQGKEQPLDE---EMKEAF 541

  Fly   617 IREVIEPMACDGLRTISVAY-----RDFVPGKAAINEVHIDGEPNWD-DEENIMTNLTCLCVVGI 675
            ....:| :...|.|.:...:     ..|..|.|            :| |:.|..|:  .||.||:
Human   542 QNAYLE-LGGLGERVLGFCHYYLPEEQFPKGFA------------FDCDDVNFTTD--NLCFVGL 591

  Fly   676 E---DPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIASKCGILRPNDDFLILEGKEFNRRI- 736
            .   ||.|..||||:.||:.|||.|.|||||:..||::||...||        |.||.|....| 
Human   592 MSMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGI--------ISEGNETVEDIA 648

  Fly   737 ------------RDSNG---------DIQQHLIDKVWPKLR--VLARSSPTDKYTLVKGIIDSTV 778
                        ||:..         |.....||::.....  |.||:||..|..:|:|     .
Human   649 ARLNIPVSQVNPRDAKACVIHGTDLKDFTSEQIDEILQNHTEIVFARTSPQQKLIIVEG-----C 708

  Fly   779 SENREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYD 843
            .....:|||||||.||.|||||||:|.||||||:||:|:|:|:||.||||:|||..|..||.::|
Human   709 QRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFD 773

  Fly   844 SIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEFPTPDLLLRK 908
            ::.|.:.:.||.|:..:....:...|....||..:.:|.::|..|.:.:::||.|....|::.|:
Human   774 NLKKSIAYTLTSNIPEITPFLLFIMANIPLPLGTITILCIDLGTDMVPAISLAYEAAESDIMKRQ 838

  Fly   909 PYG-RTKPLISRTMMKNILGQALYQLIIIFGLLFVGDVIL-----------------------DI 949
            |.. ||..|::..::....||  ..:|...|..|...|||                       |:
Human   839 PRNPRTDKLVNERLISMAYGQ--IGMIQALGGFFSYFVILAENGFLPGNLVGIRLNWDDRTVNDL 901

  Fly   950 ESGRGQE--LNAGPTQHFTIIFNTFVMMTLFNEINARKIHGQRNVI--EGLLTNPIFYTIWIFTM 1010
            |...||:  ........||.....||.:.:....:......:||.:  :|:....:.:.::..|.
Human   902 EDSYGQQWTYEQRKVVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETA 966

  Fly  1011 ISQVLIIQYGKMAFSTKALTL-DQWLWCIF 1039
            ::..|....| |..:.:...| ..|.:|.|
Human   967 LAAFLSYCPG-MDVALRMYPLKPSWWFCAF 995

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMCANP_001014689.3 ATPase-IIB_Ca 1..1057 CDD:273668 303/1135 (27%)
Cation_ATPase_N 36..104 CDD:279080 21/80 (26%)
E1-E2_ATPase 172..448 CDD:278548 70/285 (25%)
Cation_ATPase 505..598 CDD:289987 24/113 (21%)
HAD_like 676..807 CDD:119389 59/157 (38%)
Cation_ATPase_C 873..1051 CDD:279079 41/196 (21%)
ATP_Ca_trans_C 1096..1142 CDD:289209
ATP1A3NP_001243143.1 ATPase-IIC_X-K 30..1026 CDD:273445 303/1135 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53587
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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