DRSC/TRiP Functional Genomics Resources

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Protein Alignment PMCA and SPoCk

DIOPT Version :10

Sequence 1:NP_001014689.3 Gene:PMCA / 43787 FlyBaseID:FBgn0259214 Length:1255 Species:Drosophila melanogaster
Sequence 2:NP_001262220.1 Gene:SPoCk / 40495 FlyBaseID:FBgn0052451 Length:1062 Species:Drosophila melanogaster


Alignment Length:1171 Identity:300/1171 - (25%)
Similarity:501/1171 - (42%) Gaps:327/1171 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DGRPAQYGISLKQLRELMEHRGREGVMKIAENG--GIHELCKKLYTSPNEGLSGSKADEEHRRET 67
            :|...|.|::|..          |.::..:|:.  ...|:..:|......||..::|  ::|.:.
  Fly    90 NGNIIQTGLTLTP----------EMLLSTSESSTHSASEVAGRLQVDVRTGLKWTEA--KYRAKI 142

  Fly    68 FGSN---VIPPKPP-KTFLTLVWEALQDVTLIILEVAALVSLGLSFYKPADEDAPVLQEEEEHHG 128
            .|.|   ::...|. |.::    |..::..:::|..:||||:.:..:    :||           
  Fly   143 IGHNELLLVAEDPTWKKYI----EQFRNPLILLLLGSALVSVIMKQF----DDA----------- 188

  Fly   129 WIEGLAILISVIVVVIVTAFNDYSKERQFRGLQNRIEGE-HKFSVIRGGEVCQISVGDILVGDIA 192
                ::|.|::::||.|....:|..|:....|:..:..| |   .:|.|.:......:::.|||.
  Fly   189 ----VSITIAILIVVTVAFIQEYRSEKSLEELKKLVPPECH---CLREGRLDTFLARELVPGDIV 246

  Fly   193 QVKYGDLLPADGCLIQSNDLKVDESSLTGESDHVKKGPDVDPMVLSGTHVME------------- 244
            .:..||.:|||..|.::.||.:||||.|||::..:|..||   :|:.|:|.:             
  Fly   247 HLNVGDRVPADVRLFEAVDLSIDESSFTGETEPARKITDV---LLNNTNVKDHSNMKNIAFMGTL 308

  Fly   245 ---GSGKMVVTAVGVNSQAGIIFTLLGAAVDEQEAEIKKMKKEAKRANKQKNLTGENDGRSQIKG 306
               |:||.:|.:.|..|:.|.:|.::.|                                     
  Fly   309 VRCGNGKGIVVSTGERSEFGEVFKMMQA------------------------------------- 336

  Fly   307 SQAPSQRETVTSEITKSESEGNHLPQSSSSGAAETGHKKEKSVLQAKLTKLAIQIGYAGSTIAVL 371
            .:||                                    |:.||..:..|..|:.:  .:..::
  Fly   337 EEAP------------------------------------KTPLQKSMDILGAQLSF--YSFLII 363

  Fly   372 TVIILIIQFCIKTFVIDEKPWKNTYANNLVKHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMK 436
            .||:|:       ..:..||        |.:...|.|::.|.|:|||||:.||::||..|.:|.|
  Fly   364 GVIMLL-------GWLQGKP--------LSEMFNISVSLAVAAIPEGLPIVVTVTLALGVMRMAK 413

  Fly   437 DNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVV-------------------QSYICEKLCK 482
            .|::|:.|...||:|....||||||||||.|.||..                   |..|..:.|.
  Fly   414 RNSIVKKLPTVETLGCVNVICSDKTGTLTKNEMTATIIITSDGYMADVTGAGYNDQGEIHIRHCN 478

  Fly   483 VLPTLSDIPQHVGNLITMGISVNSAYTSNIMAGHNPGDLPIQVGNKTECALLGFVQGLGVKYQSI 547
               .:.....::.||:.:|...|:||..|       |.|   :|..||.||:......|:     
  Fly   479 ---NVEMAKTNITNLLEIGAVCNNAYIQN-------GTL---LGQPTEGALVAVAMKNGM----- 525

  Fly   548 RDEITEDKFTRV--YTFNSVRKSMGT-VIPRPNGGYR--LYTKGASEIIMKKCA-FIYGHEGTLE 606
              ..|.:.:.|:  |.|:|.:|.|.. .|.:.|....  .:.|||.|.::.:|. :.:|.:..  
  Fly   526 --YATAENYVRIQEYPFSSEQKMMAVKCIHKYNNNKEEIFFAKGALETLLPQCTKYQFGTQTV-- 586

  Fly   607 KFTRDMQERLIREVIEPMACDGLRTISVAYRDFVPGKAAINEVHIDGEPNWDDEENIMTNLTCLC 671
            ..|:..:...:.|..| :...|||.:::|     .|::                   |.:|....
  Fly   587 PLTKQNEAEFLAEAYE-IGRKGLRVLALA-----KGRS-------------------MQDLIYCG 626

  Fly   672 VVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSI------------------------- 711
            :|||.||.||.|.::|....::|:.|:|||||...||.:|                         
  Fly   627 LVGITDPPRPLVRESIEMLMQSGVRVKMVTGDAQETALAIDPSRRLQAVPTHAIPAWPTAGGVPL 691

  Fly   712 --ASKC---------------------GILRPNDDFL--------ILEGKEFNRRIRDSNGDIQQ 745
              ||.|                     |:.....:.:        .|.|:|.::        :.:
  Fly   692 CSASACCSTNCLENAMKEIYLTALAQQGLPLVTANLIGIDTIHHQTLSGQEMDQ--------MNE 748

  Fly   746 HLIDKVWPKLRVLARSSPTDKYTLVKGIIDSTVSENREVVAVTGDGTNDGPALKKADVGFAMGIA 810
            |.:|||...:.|..|.||..|..:||     ::..:..:|.:||||.|||.||||||:|.|||..
  Fly   749 HQLDKVANNVSVFYRVSPRHKLEIVK-----SLQRSGNIVGMTGDGVNDGVALKKADIGIAMGKN 808

  Fly   811 GTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQD--S 873
            ||||.|||:|:||.:|:|.:|:.|:..|:.::.:|..|::|||:.::.|  :|.|....:.|  :
  Fly   809 GTDVCKEAADMILVNDDFHTIIAAIEEGKGIFYNIRNFVRFQLSTSIAA--LALIALATLMDIAN 871

  Fly   874 PLKAVQMLWVNLIMDTLASLALATEFPTPDLLLRKPYGRTKPLISRTMMKNILGQALYQLIIIFG 938
            ||.|:|:||:|:|||...:.:|..|....|:|.:||....:|:|:::::.|:|   |...||:.|
  Fly   872 PLNAMQILWINIIMDGPPAQSLGVEPVDHDVLKQKPRNVKQPMITKSVVVNVL---LSASIIVLG 933

  Fly   939 LLFVGDVILDIESGRGQELNAGPTQH-FTIIFNTFVMMTLFNEINARKIHGQRNVIE-GLLTNPI 1001
            .|:|    ...|...|   ..|.|:. .|:.|..||...:||.::.|.  ..::|.. ||.||.:
  Fly   934 TLWV----FQREMADG---TLGKTKRDTTMTFTCFVFFDMFNALSCRS--QTKSVFTIGLTTNRM 989

  Fly  1002 FYTIWIFTMISQVLIIQYG--KMAFSTKALTLDQWLWCIFFGIGTLVWGQLITSVPTRKLPKILS 1064
            |.....|::|.|:|::.:.  :|.|.|:|||    .:.||| :.:|....|:.|       :|..
  Fly   990 FLLAVAFSIIGQMLVVYFPPLQMVFQTEALT----PYDIFF-LVSLTSSVLVVS-------EIKK 1042

  Fly  1065 W 1065
            |
  Fly  1043 W 1043

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMCANP_001014689.3 P-type_ATPase_Ca_PMCA-like 62..921 CDD:319776 246/962 (26%)
Cation_ATPase_C 873..1051 CDD:376368 57/181 (31%)
ATP_Ca_trans_C 1096..1141 CDD:463575
SPoCkNP_001262220.1 P-type_ATPase_SPCA 139..1042 CDD:319779 288/1107 (26%)
Blue background indicates that the domain is not in the aligned region.

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