DRSC/TRiP Functional Genomics Resources

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Protein Alignment PMCA and ATP7

DIOPT Version :10

Sequence 1:NP_001014689.3 Gene:PMCA / 43787 FlyBaseID:FBgn0259214 Length:1255 Species:Drosophila melanogaster
Sequence 2:NP_572756.3 Gene:ATP7 / 32142 FlyBaseID:FBgn0030343 Length:1254 Species:Drosophila melanogaster


Alignment Length:948 Identity:211/948 - (22%)
Similarity:347/948 - (36%) Gaps:278/948 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 ISVGDILVGDIAQVKYGDLLPADGCLIQSNDLKVDESSLTGESDHVKKGPDVDPMVLSGTHVMEG 245
            |||..:..|||.:|..|..:|.||.::..:. ..|||.:||||..|.|        ..|:.|:.|
  Fly   540 ISVDYVQRGDILKVIPGAKVPVDGKVLYGHS-SCDESLITGESMPVAK--------RKGSVVIGG 595

  Fly   246 SGKMVVTAVGVNSQAGIIFTLLGAAVDEQEAEIKKMKKEAKRANKQKNLTGENDGRSQIKGSQAP 310
            |         :| |.|::..                  ||..       ||||            
  Fly   596 S---------IN-QNGVLLV------------------EATH-------TGEN------------ 613

  Fly   311 SQRETVTSEITKSESEGNHLPQSSSSGAAETGHKKEKSVLQAKLTKLAIQI-GYAGSTIAVLTVI 374
                |..::|.:...|            |:|.        :|.:.:||.:| ||....:.|::.|
  Fly   614 ----TTLAQIVRLVEE------------AQTS--------KAPIQQLADRIAGYFVPFVVVVSSI 654

  Fly   375 ILIIQFCIKTFVIDEKPWKNTYANNLVKHLII-------GVTVLVVAVPEGLPLAVTLSLAYSVK 432
            .||....|.....:..|....:..::.::.||       .::||.:|.|..|.||...::..:..
  Fly   655 TLIAWIIIGFSNPNLVPVAMEHKMHMDQNTIIVSYAFKCALSVLAIACPCALGLATPTAVMVATG 719

  Fly   433 KMMKDNNLVRHLDACETMGNATAICSDKTGTLT-----TNRMTV-VQSYICEKLCKVLPTLSDIP 491
            ....:..||:...|.|.......:..|||||:|     |:::|: |.:.:| .|.:.|..:....
  Fly   720 TGAINGVLVKGATALENAHKVKTVVFDKTGTITHGTPMTSKVTLFVTAQVC-SLARALTIVGAAE 783

  Fly   492 QHVGNLITMGISVNSAYTSNIMAGHNPGDLPIQVGNKTECALLGFVQGLGVKY------QSIRDE 550
            |:..:.|...|   ..:..:::   |.|..| |.|:..:.:....|.|.|::.      |::|..
  Fly   784 QNSEHPIASAI---VHFAKDML---NVGATP-QAGSFGKSSHFQAVPGCGIRVTVSNYEQTLRQA 841

  Fly   551 ITEDKFTRVYTFNSVRKSMGTVIPRPNGGYRLYTKGASEIIMKKCAFIYGHEGTLEKFTRDM--- 612
            ...|   |:..:.::.::      .|.|...:....:.|.::.:.:.....|...::...|:   
  Fly   842 CNAD---RIINYENLHRT------HPQGSVPVDNGASIEHLLPQRSVRKSMELNNQQLLSDLVLE 897

  Fly   613 -QERLI--REVIEPMACDGLRTISVAYRDFVPGKAAINEVHID-GEPNWDDEENIMTNLTC---- 669
             :|.|:  :::|:....    .:.:..|:::...|.  ||.:: .:....:|....|.:.|    
  Fly   898 PEEELLTDQKIIDSPEI----LVLIGNREWMERNAI--EVPLEISDCMTHEERKGHTAVLCALNG 956

  Fly   670 --LCVVGIEDPVRPEVPDAIRKCQRAGITVRMVTGDNINTARSIASKCGILRPNDDFLILEGKEF 732
              :|:..:.|.|:||...|:...:|.||.|.::||||.|||.|||.:.||               
  Fly   957 QLVCMFAVSDMVKPEAHLAVYTLKRMGIDVVLLTGDNKNTAASIAREVGI--------------- 1006

  Fly   733 NRRIRDSNGDIQQHLIDKVWPKLRVLARSSPTDKYTLVKGIIDSTVSENREVVAVTGDGTNDGPA 797
                                  ..|.|...|:.|...::     .:..|...||:.|||.||.||
  Fly  1007 ----------------------RTVYAEVLPSHKVAKIQ-----RIQANGIRVAMVGDGVNDSPA 1044

  Fly   798 LKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIV 862
            |.:||||..:. ||||||.|||||:|..::...:|..:...|.....|.....|....|::.:.:
  Fly  1045 LAQADVGITIA-AGTDVAAEASDIVLMRNDLLDVVACLDLSRCTVRRIRYNFFFASMYNLLGIPL 1108

  Fly   863 AFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEFPTPDLLL---RKPYGRTKPLISRTMMKN 924
            | .|..|    |.....:.|    |.::|..|.:.......|||   |||..:|           
  Fly  1109 A-SGLFA----PYGFTLLPW----MASVAMAASSVSVVCSSLLLKMYRKPTAKT----------- 1153

  Fly   925 ILGQALYQLIIIFGLLFVGDVILDIESGRGQELNAGPTQHFTIIFNTFVMMTLFNEINARKIHGQ 989
             |..|.|            :..|..|...|.|                      :|::...:|  
  Fly  1154 -LRTAEY------------EAQLAAERASGSE----------------------DELDKLSLH-- 1181

  Fly   990 RNVIEGLLTNPIFYTIWIFTMISQVLIIQYGKMAFSTKALTLDQWLWCIFFGIGTLVWGQLITSV 1054
                .||...|                 :.|:|.|...:.:|...::...:|        .||| 
  Fly  1182 ----RGLDDLP-----------------EKGRMPFKRSSTSLISRIFMHDYG--------NITS- 1216

  Fly  1055 PTRKLPKILSWGRG--HPEEYTDG-MNLGEERFDSIDS 1089
            |..|      :|.|  .|||..|| ..:...||.:.||
  Fly  1217 PDAK------YGEGLLDPEEQYDGRTKIVRSRFHANDS 1248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMCANP_001014689.3 P-type_ATPase_Ca_PMCA-like 62..921 CDD:319776 178/775 (23%)
Cation_ATPase_C 873..1051 CDD:376368 29/180 (16%)
ATP_Ca_trans_C 1096..1141 CDD:463575
ATP7NP_572756.3 CopZ 11..76 CDD:442020
HMA 97..159 CDD:238219
chaper_CopZ_Eh 212..276 CDD:411374
HMA 287..350 CDD:238219
P-type_ATPase_Cu-like 376..1130 CDD:319783 170/744 (23%)
Blue background indicates that the domain is not in the aligned region.

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