DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PMCA and SPAPB2B4.04c

DIOPT Version :9

Sequence 1:NP_001014689.3 Gene:PMCA / 43787 FlyBaseID:FBgn0259214 Length:1255 Species:Drosophila melanogaster
Sequence 2:NP_593890.1 Gene:SPAPB2B4.04c / 2543477 PomBaseID:SPAPB2B4.04c Length:1292 Species:Schizosaccharomyces pombe


Alignment Length:1307 Identity:465/1307 - (35%)
Similarity:653/1307 - (49%) Gaps:287/1307 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 AQYGISLKQLRELMEHRGREGVMKIAENGGIHELCKKLYTSPNEGLSGSK---AD---------- 60
            |.:..|:..|:.|.:.:....:..|   .|:..|||.|...|:.|:|..:   ||          
pombe   117 APFAFSIPLLQRLQDPKNTSLLHAI---HGLKGLCKGLKVDPSTGISTHEPHYADKLQMSDILND 178

  Fly    61 --------------------------EEHRRETFGSNVIPPKPPKTFLTLVWEALQDVTLIILEV 99
                                      :..|.:.:|.||:|....|..:.|:.||.:|..||:|.:
pombe   179 DSNPKLVVHLDRIRSQDNNPEAKVSHDSDRVKYYGKNVLPEHDSKGLIRLMLEAFKDKVLILLSI 243

  Fly   100 AALVSLGLSFY----KPADEDAPVLQEEEEHHGWIEGLAILISVIVVVIVTAFNDYSKERQFRGL 160
            ||:|||.|..|    :|...| |:..:.|....|:||:||:.::::||.|...||:.||.||:.|
pombe   244 AAVVSLALGLYQTFGQPPTLD-PITGKPEPRVEWVEGVAIMAAIVIVVTVGGVNDWQKELQFKKL 307

  Fly   161 QNRIEGEHKFSVIRGGEVCQISVGDILVGDIAQVKYGDLLPADGCLIQSNDLKVDESSLTGESDH 225
            ..:: ......|:|.|.|...||.|::|||:..|:.||::|.||.||:||:|.:|||::|||:|:
pombe   308 NAKV-SNFDVQVLRDGAVHSTSVFDLVVGDVLFVEAGDVVPVDGVLIESNNLVLDESAMTGETDN 371

  Fly   226 VKK----------GPDV------DPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGAAVDEQ 274
            :||          .|||      ||.::|||.::||:||::||||||||..|             
pombe   372 IKKVDANTAIERTSPDVEYRKNADPYLISGTTILEGNGKLLVTAVGVNSFNG------------- 423

  Fly   275 EAEIKKMKKEAKRANKQKNLTGENDGRSQIKGSQAPSQRETVTSEITKSESEGNHLPQSSSSGAA 339
                                                  |.|:.     ..:||...|        
pombe   424 --------------------------------------RTTMA-----MRTEGQATP-------- 437

  Fly   340 ETGHKKEKSVLQAKLTKLAIQIGYAGSTIAVLTVIILIIQFCIKTFVIDEKPWKNTYANNLVKHL 404
                      ||.:|:::|..|...|...:.|..|:|:|:|.::....|... ||. ....::.|
pombe   438 ----------LQLRLSRVADAIAKLGGAASALLFIVLLIEFLVRLKSNDSSS-KNK-GQEFLQIL 490

  Fly   405 IIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRM 469
            |:.||:|||||||||||||||:||::..:|.|||||||||.||||||.||.||||||||||.|||
pombe   491 IVSVTLLVVAVPEGLPLAVTLALAFATNRMQKDNNLVRHLQACETMGTATNICSDKTGTLTQNRM 555

  Fly   470 TVV-----------------------------------QSYICEKLCKVLPTLSDIPQHVGNLIT 499
            |||                                   .::..::|.   |.|.|       |..
pombe   556 TVVAGGFGTDVLFFDHNDETPTNVDQGSDSSKFEDAGASAFAFKRLS---PELRD-------LTL 610

  Fly   500 MGISVNSAYTSNIMAGHNPGDLPIQVGNKTECALLGF-VQGLGV-KYQSIRDEITEDKFTRVYTF 562
            ..|:|||  |...:...| .|.|..:|:|||.|||.. |:.||: ...|:|..:...:|   ::|
pombe   611 YSIAVNS--TCRQLFEDN-SDTPRFIGSKTETALLDMSVKELGLTNVDSMRSSVDIKQF---FSF 669

  Fly   563 NSVRKSMGTVIPRPNGGYRLYTKGASEIIMKKCAFIYGHEGTLEKFTRDMQER--LIREVIEPMA 625
            :|.||:.|.:....: .|....||..|.::::...:..: |:|:: ..||...  ..:|:|...|
pombe   670 SSDRKASGAIFEYKD-KYYFVVKGMPERVLQQSTSVITN-GSLDE-VEDMHSHADYFKEMITGYA 731

  Fly   626 CDGLRTISVAYRDF---VPGKAAINEVHIDGEPNWDDEENIMTNLTCLCVVGIEDPVRPEVPDAI 687
            ...|||:.:.||.|   .|.....|:........|:|   ..|::|.|...||.||:||:||.|:
pombe   732 KRSLRTLGLCYRVFDSWPPKDIPTNDEDSSNPLKWED---AFTDMTFLGFFGIMDPIRPDVPLAV 793

  Fly   688 RKCQRAGITVRMVTGDNINTARSIASKCGILRPNDDFLILEGKEFNRRIRDSNGDIQQHLIDKVW 752
            :.||.||:||||||||||.||::|||:|||.  .:|.:.:||.|| |.:.|     ::.|  ::.
pombe   794 KVCQGAGVTVRMVTGDNIVTAKAIASQCGIY--TEDGISMEGPEF-RSLSD-----EKRL--EIL 848

  Fly   753 PKLRVLARSSPTDKYTLVKGIIDSTVSENREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKE 817
            |||.|||||||.||..|::|:     .:...|||||||||||.||||||:|||:||.:||:||||
pombe   849 PKLDVLARSSPLDKQLLIEGL-----QKLGNVVAVTGDGTNDAPALKKANVGFSMGKSGTEVAKE 908

  Fly   818 ASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAV--QDSPLKAVQM 880
            ||||||.||||||||||:.|||.|.|::.||||||:|||:.||.:..|.|.|.  |.|.|.|||:
pombe   909 ASDIILMDDNFSSIVKAIAWGRTVNDAVKKFLQFQITVNITAVFLTIISAVASTDQSSVLTAVQL 973

  Fly   881 LWVNLIMDTLASLALATEFPTPDLLLRKPYGRTKPLISRTMMKNILGQALYQLIIIFGLLFVGDV 945
            |||||||||||:|||||:.|||::|.|||......|.:..|.|.|:.|::|||.:...|.|.|:.
pombe   974 LWVNLIMDTLAALALATDPPTPEVLKRKPEKPGASLFTFDMWKMIICQSMYQLAVTLVLHFAGNS 1038

  Fly   946 ILDIESGRGQELNAGPTQHFTIIFNTFVMMTLFNEINARKIHGQRNVIEGLLTNPIFYTIWIFTM 1010
            |....|... ::|       ||:|||||.:.||||||.|::..:.|:.|.:..|.:|..|::...
pombe  1039 IFHYPSNTA-DMN-------TIVFNTFVWLQLFNEINNRRLDNKLNIFERINHNFLFIAIFVIVA 1095

  Fly  1011 ISQVLIIQYGKMAFSTKALTLDQWLWCIFFGIGTLVWGQLITSVPTRKLPKIL---------SW- 1065
            ..||:|:.:|..|||.|.:....|...|.||:.::..|.||..||...|.|:|         || 
pombe  1096 GIQVIIVFFGGAAFSVKRIDGKGWAISIVFGVISIPLGALIRCVPNNFLRKVLPVKTIDTVFSWI 1160

  Fly  1066 -------GRGHPEEYTDGMNL-------GEERFDSIDSDKKPRAGQILWIRGLTRLQTQLRVIRA 1116
                   .|...:...:.::|       ..|..|||    :...|.:..||| .|::..|...: 
pombe  1161 LNPRFRSKRRSTDHDVESLSLIPYEPTSPNEVIDSI----RHSLGFVQRIRG-GRIRHLLNNSK- 1219

  Fly  1117 FRSTLEDLNER---RSMHSLHSLRSPRTG--------IPV------AVG--GGHPLYNFNLLNPN 1162
            |...:|.|.||   |.......:|||...        ||:      |.|  |||.:         
pombe  1220 FDKQMEALPERLRPRVKQRFMKIRSPSVSSATSVALMIPISTLVSEASGRLGGHDI--------- 1275

  Fly  1163 YIKHQQQ 1169
            :|.|.:|
pombe  1276 WISHNRQ 1282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMCANP_001014689.3 ATPase-IIB_Ca 1..1057 CDD:273668 429/1150 (37%)
Cation_ATPase_N 36..104 CDD:279080 25/106 (24%)
E1-E2_ATPase 172..448 CDD:278548 102/291 (35%)
Cation_ATPase 505..598 CDD:289987 28/94 (30%)
HAD_like 676..807 CDD:119389 71/130 (55%)
Cation_ATPase_C 873..1051 CDD:279079 74/177 (42%)
ATP_Ca_trans_C 1096..1142 CDD:289209 15/48 (31%)
SPAPB2B4.04cNP_593890.1 ATPase-IIB_Ca 97..1140 CDD:273668 427/1148 (37%)
Cation_ATPase_N <206..248 CDD:279080 15/41 (37%)
E1-E2_ATPase 316..534 CDD:278548 102/293 (35%)
Cation_ATPase 624..704 CDD:289987 25/84 (30%)
COG4087 <838..916 CDD:226572 50/89 (56%)
Cation_ATPase_C 966..1137 CDD:279079 75/178 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 126 1.000 Domainoid score I1391
eggNOG 1 0.900 - - E2759_KOG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 631 1.000 Inparanoid score I138
OMA 1 1.010 - - QHG53587
OrthoFinder 1 1.000 - - FOG0000362
OrthoInspector 1 1.000 - - oto100542
orthoMCL 1 0.900 - - OOG6_100143
Panther 1 1.100 - - LDO PTHR24093
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R99
SonicParanoid 1 1.000 - - X220
TreeFam 1 0.960 - -
1211.860

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