DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PMCA and pmc1

DIOPT Version :10

Sequence 1:NP_001014689.3 Gene:PMCA / 43787 FlyBaseID:FBgn0259214 Length:1255 Species:Drosophila melanogaster
Sequence 2:NP_593890.1 Gene:pmc1 / 2543477 PomBaseID:SPAPB2B4.04C Length:1292 Species:Schizosaccharomyces pombe


Alignment Length:1307 Identity:465/1307 - (35%)
Similarity:653/1307 - (49%) Gaps:287/1307 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 AQYGISLKQLRELMEHRGREGVMKIAENGGIHELCKKLYTSPNEGLSGSK---AD---------- 60
            |.:..|:..|:.|.:.:....:..|   .|:..|||.|...|:.|:|..:   ||          
pombe   117 APFAFSIPLLQRLQDPKNTSLLHAI---HGLKGLCKGLKVDPSTGISTHEPHYADKLQMSDILND 178

  Fly    61 --------------------------EEHRRETFGSNVIPPKPPKTFLTLVWEALQDVTLIILEV 99
                                      :..|.:.:|.||:|....|..:.|:.||.:|..||:|.:
pombe   179 DSNPKLVVHLDRIRSQDNNPEAKVSHDSDRVKYYGKNVLPEHDSKGLIRLMLEAFKDKVLILLSI 243

  Fly   100 AALVSLGLSFY----KPADEDAPVLQEEEEHHGWIEGLAILISVIVVVIVTAFNDYSKERQFRGL 160
            ||:|||.|..|    :|...| |:..:.|....|:||:||:.::::||.|...||:.||.||:.|
pombe   244 AAVVSLALGLYQTFGQPPTLD-PITGKPEPRVEWVEGVAIMAAIVIVVTVGGVNDWQKELQFKKL 307

  Fly   161 QNRIEGEHKFSVIRGGEVCQISVGDILVGDIAQVKYGDLLPADGCLIQSNDLKVDESSLTGESDH 225
            ..:: ......|:|.|.|...||.|::|||:..|:.||::|.||.||:||:|.:|||::|||:|:
pombe   308 NAKV-SNFDVQVLRDGAVHSTSVFDLVVGDVLFVEAGDVVPVDGVLIESNNLVLDESAMTGETDN 371

  Fly   226 VKK----------GPDV------DPMVLSGTHVMEGSGKMVVTAVGVNSQAGIIFTLLGAAVDEQ 274
            :||          .|||      ||.::|||.::||:||::||||||||..|             
pombe   372 IKKVDANTAIERTSPDVEYRKNADPYLISGTTILEGNGKLLVTAVGVNSFNG------------- 423

  Fly   275 EAEIKKMKKEAKRANKQKNLTGENDGRSQIKGSQAPSQRETVTSEITKSESEGNHLPQSSSSGAA 339
                                                  |.|:.     ..:||...|        
pombe   424 --------------------------------------RTTMA-----MRTEGQATP-------- 437

  Fly   340 ETGHKKEKSVLQAKLTKLAIQIGYAGSTIAVLTVIILIIQFCIKTFVIDEKPWKNTYANNLVKHL 404
                      ||.:|:::|..|...|...:.|..|:|:|:|.::....|... ||. ....::.|
pombe   438 ----------LQLRLSRVADAIAKLGGAASALLFIVLLIEFLVRLKSNDSSS-KNK-GQEFLQIL 490

  Fly   405 IIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRM 469
            |:.||:|||||||||||||||:||::..:|.|||||||||.||||||.||.||||||||||.|||
pombe   491 IVSVTLLVVAVPEGLPLAVTLALAFATNRMQKDNNLVRHLQACETMGTATNICSDKTGTLTQNRM 555

  Fly   470 TVV-----------------------------------QSYICEKLCKVLPTLSDIPQHVGNLIT 499
            |||                                   .::..::|.   |.|.|       |..
pombe   556 TVVAGGFGTDVLFFDHNDETPTNVDQGSDSSKFEDAGASAFAFKRLS---PELRD-------LTL 610

  Fly   500 MGISVNSAYTSNIMAGHNPGDLPIQVGNKTECALLGF-VQGLGV-KYQSIRDEITEDKFTRVYTF 562
            ..|:|||  |...:...| .|.|..:|:|||.|||.. |:.||: ...|:|..:...:|   ::|
pombe   611 YSIAVNS--TCRQLFEDN-SDTPRFIGSKTETALLDMSVKELGLTNVDSMRSSVDIKQF---FSF 669

  Fly   563 NSVRKSMGTVIPRPNGGYRLYTKGASEIIMKKCAFIYGHEGTLEKFTRDMQER--LIREVIEPMA 625
            :|.||:.|.:....: .|....||..|.::::...:..: |:|:: ..||...  ..:|:|...|
pombe   670 SSDRKASGAIFEYKD-KYYFVVKGMPERVLQQSTSVITN-GSLDE-VEDMHSHADYFKEMITGYA 731

  Fly   626 CDGLRTISVAYRDF---VPGKAAINEVHIDGEPNWDDEENIMTNLTCLCVVGIEDPVRPEVPDAI 687
            ...|||:.:.||.|   .|.....|:........|:|   ..|::|.|...||.||:||:||.|:
pombe   732 KRSLRTLGLCYRVFDSWPPKDIPTNDEDSSNPLKWED---AFTDMTFLGFFGIMDPIRPDVPLAV 793

  Fly   688 RKCQRAGITVRMVTGDNINTARSIASKCGILRPNDDFLILEGKEFNRRIRDSNGDIQQHLIDKVW 752
            :.||.||:||||||||||.||::|||:|||.  .:|.:.:||.|| |.:.|     ::.|  ::.
pombe   794 KVCQGAGVTVRMVTGDNIVTAKAIASQCGIY--TEDGISMEGPEF-RSLSD-----EKRL--EIL 848

  Fly   753 PKLRVLARSSPTDKYTLVKGIIDSTVSENREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKE 817
            |||.|||||||.||..|::|:     .:...|||||||||||.||||||:|||:||.:||:||||
pombe   849 PKLDVLARSSPLDKQLLIEGL-----QKLGNVVAVTGDGTNDAPALKKANVGFSMGKSGTEVAKE 908

  Fly   818 ASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAV--QDSPLKAVQM 880
            ||||||.||||||||||:.|||.|.|::.||||||:|||:.||.:..|.|.|.  |.|.|.|||:
pombe   909 ASDIILMDDNFSSIVKAIAWGRTVNDAVKKFLQFQITVNITAVFLTIISAVASTDQSSVLTAVQL 973

  Fly   881 LWVNLIMDTLASLALATEFPTPDLLLRKPYGRTKPLISRTMMKNILGQALYQLIIIFGLLFVGDV 945
            |||||||||||:|||||:.|||::|.|||......|.:..|.|.|:.|::|||.:...|.|.|:.
pombe   974 LWVNLIMDTLAALALATDPPTPEVLKRKPEKPGASLFTFDMWKMIICQSMYQLAVTLVLHFAGNS 1038

  Fly   946 ILDIESGRGQELNAGPTQHFTIIFNTFVMMTLFNEINARKIHGQRNVIEGLLTNPIFYTIWIFTM 1010
            |....|... ::|       ||:|||||.:.||||||.|::..:.|:.|.:..|.:|..|::...
pombe  1039 IFHYPSNTA-DMN-------TIVFNTFVWLQLFNEINNRRLDNKLNIFERINHNFLFIAIFVIVA 1095

  Fly  1011 ISQVLIIQYGKMAFSTKALTLDQWLWCIFFGIGTLVWGQLITSVPTRKLPKIL---------SW- 1065
            ..||:|:.:|..|||.|.:....|...|.||:.::..|.||..||...|.|:|         || 
pombe  1096 GIQVIIVFFGGAAFSVKRIDGKGWAISIVFGVISIPLGALIRCVPNNFLRKVLPVKTIDTVFSWI 1160

  Fly  1066 -------GRGHPEEYTDGMNL-------GEERFDSIDSDKKPRAGQILWIRGLTRLQTQLRVIRA 1116
                   .|...:...:.::|       ..|..|||    :...|.:..||| .|::..|...: 
pombe  1161 LNPRFRSKRRSTDHDVESLSLIPYEPTSPNEVIDSI----RHSLGFVQRIRG-GRIRHLLNNSK- 1219

  Fly  1117 FRSTLEDLNER---RSMHSLHSLRSPRTG--------IPV------AVG--GGHPLYNFNLLNPN 1162
            |...:|.|.||   |.......:|||...        ||:      |.|  |||.:         
pombe  1220 FDKQMEALPERLRPRVKQRFMKIRSPSVSSATSVALMIPISTLVSEASGRLGGHDI--------- 1275

  Fly  1163 YIKHQQQ 1169
            :|.|.:|
pombe  1276 WISHNRQ 1282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMCANP_001014689.3 P-type_ATPase_Ca_PMCA-like 62..921 CDD:319776 365/922 (40%)
Cation_ATPase_C 873..1051 CDD:376368 74/177 (42%)
ATP_Ca_trans_C 1096..1141 CDD:463575 15/47 (32%)
pmc1NP_593890.1 P-type_ATPase_Ca_PMCA-like 206..1014 CDD:319776 365/922 (40%)
Cation_ATPase_C 966..1137 CDD:376368 75/178 (42%)

Return to query results.
Submit another query.