DRSC/TRiP Functional Genomics Resources

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Protein Alignment PMCA and catp-2

DIOPT Version :10

Sequence 1:NP_001014689.3 Gene:PMCA / 43787 FlyBaseID:FBgn0259214 Length:1255 Species:Drosophila melanogaster
Sequence 2:NP_504328.1 Gene:catp-2 / 182114 WormBaseID:WBGene00015338 Length:1050 Species:Caenorhabditis elegans


Alignment Length:1135 Identity:291/1135 - (25%)
Similarity:472/1135 - (41%) Gaps:268/1135 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 NEGLSGSKADEEHRRETFGSNVIPPKPPKT----------FLTLVWEALQDVTLIILEVAALVSL 105
            :.|||...|.|  |.|:.|.|.:  .|||.          |..|:|        |::..||.:||
 Worm    64 SRGLSKQVAAE--RLESDGRNAL--SPPKVISNWKLFLRQFKNLLW--------ILMFGAAALSL 116

  Fly   106 GLSFYKPADEDAPVLQEEEEHHGWIEGLAILISVIVVVIVTAFNDYSKERQ----FRGLQNRIEG 166
            ....|.|:|               :..|.:.|.:||::.|.....:.:|::    .|..|:.:  
 Worm   117 VAYIYDPSD---------------LTNLCVGIFIIVIIFVMCIVSFFEEKKGVEVVRAFQSLM-- 164

  Fly   167 EHKFSVIRGGEVCQISVGDILVGDIAQVKYGDLLPADGCLIQSNDLKVDESSLTGESDHVKKGPD 231
            .....|||.|....::..:::||||..|:.|..:|||..:|...|..::.||:|||::.::..  
 Worm   165 PLSCQVIRDGVEQTLNPEELVVGDIVVVRSGCKVPADIRVIACTDFYLETSSITGEAEPLEFN-- 227

  Fly   232 VDPMVLSGTHVMEG-----SGKMVVTAVGVNSQAGIIFTLLGAAVDEQEAEIKKMKKEAKRANKQ 291
             ..|....|.:.|.     :|...|...|.    ||:..                          
 Worm   228 -SAMADQKTSIFESYNIAFNGSFCVDGEGY----GIVIR-------------------------- 261

  Fly   292 KNLTGENDGRSQIKGSQAPSQRETVTSEITKSESEGNHLPQSSSSGAAETGHKKEKSVLQAKLTK 356
               |||                .||..:|                 |:.|..:||:.      .|
 Worm   262 ---TGE----------------RTVIGQI-----------------ASMTLDQKEQK------CK 284

  Fly   357 LAIQIGYAGSTIAVLTVIILIIQFCIKTFVIDEKPWKNTYANNLVKHLIIGVTVLVVA-VPEGLP 420
            ..::||.....|.|:.:|:.:|.|.:...:        ...::::::.:.|..::::| ||:|||
 Worm   285 FQVEIGRFVKFITVMAIIMAVIIFSVGLGI--------NKGHDVIRYFVTGFLMVIIANVPQGLP 341

  Fly   421 LAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVV-----QSYIC--- 477
            ..||..|....::|.|.|..::.|:..:::|..|.|.||||||||.|.|||.     .||..   
 Worm   342 TTVTTELTIIARRMAKKNVFLKKLEKIDSVGATTLIASDKTGTLTKNCMTVTDLWYNNSYNSGRP 406

  Fly   478 ---EKLCKVLPTLSDIPQH-----VGNLITMGISVNSAYTSNIMAGHNPG-------DL------ 521
               .:..|...:::..|..     :.:|:::....|.|...|.:..:.|.       |:      
 Worm   407 ENRRRSTKTRFSITSNPAQSFDAPLSDLLSVVCVCNKARIENTVTVNRPPPNVDSELDMSMYRIQ 471

  Fly   522 PIQ----VGNKTECALLGFVQGLGVKYQSIRDEITEDKFTRVY--TFNSVRK----------SMG 570
            |::    |||.:|.|||.:...: :..:.:|     :.|..|:  .||||||          :..
 Worm   472 PVKEMTIVGNPSEVALLRYASAM-LDAKELR-----ESFQVVFEIPFNSVRKYHLILATNKNTWN 530

  Fly   571 TVIPRPNGGYRLYTKGASEIIMKKCAFIYGHEGTLEKFTRDMQERLIREVIEPMACDGLRTISVA 635
            .|....:..:.:..|||.|:::|.|:.:..:..:.|...:.|::  ..|..|....:|.|.|..|
 Worm   531 QVDKNDDVEFVVMIKGAPEVLIKNCSTMNINGESKELDLKRMED--FNEAYEAFGDEGCRVIGFA 593

  Fly   636 YRDFVPGKAAINEVHIDGEP--NWDDEENIMTNLTCLCVVGIEDPVRPEVPDAIRKCQRAGITVR 698
            .:.|....:.:..:..:..|  :||          .|.:..|.||.|.:.|.||:.|:.|||.|.
 Worm   594 QKKFRARASTVFSLKSNTVPMEDWD----------FLGMSAIMDPPRDDTPKAIKACKAAGIKVY 648

  Fly   699 MVTGDNINTARSIASKCGILRPNDDFLILEGKEFNRRIRDSN-----GDIQQHLIDKVWPKLR-- 756
            |||||:.:||.:||.:.|::...:...:...::..||....:     |.....|..|.|.:|.  
 Worm   649 MVTGDHKSTATAIARQIGMIDTEEVSRVDHNQQIIRRSNSQDWAVITGSELPALTQKQWDELLQH 713

  Fly   757 ---VLARSSPTDKYTLVKGIIDSTVSENR-EVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKE 817
               |.||::|..|..:|      |.|:.| |.|.|||||.||.|||||||||.|||:||:||||:
 Worm   714 RYIVFARTTPEHKLMIV------TESQKRGECVTVTGDGVNDAPALKKADVGVAMGLAGSDVAKQ 772

  Fly   818 ASDIILTDDNFSSIVKAVMWGRNVYDSIAKFLQFQLT---VNVVAVIVAFIGACAVQDSPLKAVQ 879
            |:||||.||||||||..:..||.::|::.|.:.:.:.   ..:|.||:.|.....:..:|   ||
 Worm   773 AADIILLDDNFSSIVAGIEEGRLLFDNLRKTIAYTMAHMWPELVPVILNFFFGFPLGLTP---VQ 834

  Fly   880 MLWVNLIMDTLASLALATEFPTPDLLLRKPYGR-----TKPLISRT-----------------MM 922
            :|.::||.|...:::||.|.|..|::|:.|..:     ||.||:.|                 :.
 Worm   835 ILSIDLISDIPPAVSLAYEGPEADIMLQPPRKKDTHLVTKGLITYTYLFMSIFISIGCVCAYLLS 899

  Fly   923 KNILGQALYQLIIIFGLLF---------VGDVILDIESGRGQELNAGPTQHFTII----FNTFVM 974
            ..|.|...::|.......|         ...|||:.|........|....|.:::    |:.::.
 Worm   900 YYINGIGPWELAFTASTYFKHGAANFTTAKGVILNEEQQMYMANQAAAAFHISLVLGQAFHLWMC 964

  Fly   975 MTLFNEINARKIHGQRNVIEGLLTNPIFYTIWIFTMISQVLIIQYGKMAFSTKALTLDQWLWCIF 1039
            :|....|.|   ||..|::...........|.|||.:..|      |..|.::......||..|.
 Worm   965 LTRRVSIFA---HGLGNIVAIFAVIIDLLLICIFTFVPGV------KYIFGSQPPPWQCWLVPIV 1020

  Fly  1040 FGIGTLVWGQL----ITSVPTRKLPKILSW 1065
            .|:...::.:|    |...|..|..::..|
 Worm  1021 VGVWIWIFNELRKLGIRKYPKNKFVRLTKW 1050

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMCANP_001014689.3 P-type_ATPase_Ca_PMCA-like 62..921 CDD:319776 253/961 (26%)
Cation_ATPase_C 873..1051 CDD:376368 48/216 (22%)
ATP_Ca_trans_C 1096..1141 CDD:463575
catp-2NP_504328.1 MgtA 65..1041 CDD:440242 288/1123 (26%)
Blue background indicates that the domain is not in the aligned region.

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